Functional clusters
Information
- Type InterPro
- Description Ferric reductase transmembrane component-like domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Erythranthe guttata | scaffold_6 | 5 | CH_egut_221 | 4 | 4 | 0.00000000693249 |
| Erythranthe guttata | scaffold_2 | 5 | CH_egut_222 | 4 | 4 | 0.00000000693249 |
| Quercus lobata | 4 | 5 | CH_qlo_1530 | 3 | 7 | 0.000247433 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_774 | 3 | 3 | 0.00000271765 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_863 | 3 | 4 | 0.0000108676 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_345 | 3 | 3 | 0.000000888078 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_415 | 3 | 3 | 0.00000235128 |
| Erythranthe guttata | scaffold_6 | 6 | CH_egut_221 | 4 | 4 | 0.00000000693249 |
| Erythranthe guttata | scaffold_2 | 6 | CH_egut_222 | 4 | 4 | 0.00000000693249 |
| Quercus lobata | 4 | 6 | CH_qlo_1530 | 3 | 7 | 0.000247433 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_774 | 3 | 3 | 0.00000271765 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_863 | 3 | 4 | 0.0000108676 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_345 | 3 | 3 | 0.000000888078 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_415 | 3 | 3 | 0.00000235128 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |