Functional clusters
Information
- Type InterPro
- Description FAD-binding 8
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | ctg97_1 | 5 | CH_acertr_473 | 3 | 5 | 0.000016392 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_217 | 3 | 3 | 0.00000275938 |
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_868 | 3 | 6 | 0.0000229469 |
| Cannabis sativa | NC_044374.1 | 5 | CH_cansat_245 | 4 | 12 | 0.000000572492 |
| Capsicum annuum | PGAv.1.6.scaffold78 | 5 | CH_can_519 | 3 | 6 | 0.0000584949 |
| Davidia involucrata | GWHABJS00000005 | 5 | CH_din_506 | 3 | 8 | 0.000117504 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_358 | 5 | 5 | 0.000000000000544661 |
| Magnolia biondii | Chr11 | 5 | CH_mbi_813 | 3 | 8 | 0.0000720393 |
| Marchantia polymorpha | scaffold_193 | 5 | CH_mpo_50 | 4 | 4 | 0.00000000404607 |
| Petunia axillaris | Peaxi162Scf00194 | 5 | CH_pax_314 | 3 | 3 | 0.00000719496 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_167 | 4 | 4 | 0.00000000387877 |
| Quercus lobata | CM012294 | 5 | CH_qlo_614 | 4 | 4 | 0.00000000302028 |
| Quercus lobata | 9 | 5 | CH_qlo_615 | 4 | 4 | 0.00000000302028 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_288 | 5 | 7 | 0.0000000000104704 |
| Sechium edule | LG13 | 5 | CH_sed_258 | 3 | 3 | 0.0000117576 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_355 | 3 | 3 | 0.00000108022 |
| Acer truncatum | ctg97_1 | 6 | CH_acertr_473 | 3 | 5 | 0.000016392 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_217 | 3 | 3 | 0.00000275938 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_868 | 3 | 6 | 0.0000229469 |
| Cannabis sativa | NC_044374.1 | 6 | CH_cansat_245 | 4 | 12 | 0.000000572492 |
| Capsicum annuum | PGAv.1.6.scaffold78 | 6 | CH_can_519 | 3 | 6 | 0.0000584949 |
| Davidia involucrata | GWHABJS00000005 | 6 | CH_din_506 | 3 | 8 | 0.000117504 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_358 | 5 | 5 | 0.000000000000544661 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_1051 | 3 | 8 | 0.000465618 |
| Magnolia biondii | Chr11 | 6 | CH_mbi_813 | 3 | 8 | 0.0000720393 |
| Marchantia polymorpha | scaffold_193 | 6 | CH_mpo_50 | 4 | 4 | 0.00000000404607 |
| Petunia axillaris | Peaxi162Scf00194 | 6 | CH_pax_314 | 3 | 3 | 0.00000719496 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_167 | 4 | 4 | 0.00000000387877 |
| Quercus lobata | CM012294 | 6 | CH_qlo_614 | 4 | 4 | 0.00000000302028 |
| Quercus lobata | 9 | 6 | CH_qlo_615 | 4 | 4 | 0.00000000302028 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_288 | 5 | 7 | 0.0000000000104704 |
| Sechium edule | LG13 | 6 | CH_sed_258 | 3 | 3 | 0.0000117576 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_355 | 3 | 3 | 0.00000108022 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |