Functional clusters
Information
- Type InterPro
- Description Coatomer, gamma subunit, appendage, Ig-like subdomain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 5 | CH_arhy_1213 | 2 | 3 | 0.000538871 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 5 | CH_arhy_1214 | 2 | 3 | 0.000538871 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_507 | 2 | 2 | 0.000225107 |
| Quercus lobata | 1 | 5 | CH_qlo_1457 | 2 | 2 | 0.000154887 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 6 | CH_arhy_1213 | 2 | 3 | 0.000538871 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 6 | CH_arhy_1214 | 2 | 3 | 0.000538871 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_507 | 2 | 2 | 0.000225107 |
| Quercus lobata | 1 | 6 | CH_qlo_1457 | 2 | 2 | 0.000154887 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |