Functional clusters
Information
- Type InterPro
- Description X8 domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-2 | 5 | CH_aar_101 | 5 | 5 | 0.000000000564433 |
| Brassica napus | A04 | 5 | CH_bna_1332 | 3 | 3 | 0.000445966 |
| Corylus avellana | 3 | 5 | CH_cav_416 | 4 | 9 | 0.0000208967 |
| Coffea canephora | chr7 | 5 | CH_ccan_241 | 4 | 38 | 0.00000227509 |
| Fragaria vesca | Fvb7 | 5 | CH_fve_207 | 5 | 6 | 0.0000000011472 |
| Gossypium hirsutum | D10 | 5 | CH_ghi_1159 | 3 | 3 | 0.000419324 |
| Gossypium hirsutum | D10 | 5 | CH_ghi_1160 | 3 | 3 | 0.000419324 |
| Gossypium raimondii | Chr11 | 5 | CH_gra_540 | 3 | 3 | 0.000216064 |
| Lotus japonicus | chr4 | 5 | CH_lja_341 | 5 | 22 | 0.0000192147 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_654 | 4 | 9 | 0.0000171085 |
| Magnolia biondii | Chr14 | 5 | CH_mbi_1174 | 3 | 6 | 0.000595761 |
| Olea europaea | chr9 | 5 | CH_oeu_100 | 5 | 7 | 0.00000000638683 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_274 | 5 | 14 | 0.000000177674 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_1035 | 3 | 3 | 0.0000591304 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_547 | 4 | 4 | 0.0000000601122 |
| Trochodendron aralioides | group16 | 5 | CH_tar_827 | 4 | 18 | 0.000450321 |
| Aethionema arabicum | LG-2 | 6 | CH_aar_101 | 5 | 5 | 0.000000000564433 |
| Brassica napus | A04 | 6 | CH_bna_1332 | 3 | 3 | 0.000445966 |
| Corylus avellana | 3 | 6 | CH_cav_416 | 4 | 9 | 0.0000208967 |
| Coffea canephora | chr7 | 6 | CH_ccan_241 | 4 | 38 | 0.00000227509 |
| Fragaria vesca | Fvb7 | 6 | CH_fve_207 | 5 | 6 | 0.0000000011472 |
| Gossypium hirsutum | D10 | 6 | CH_ghi_1159 | 3 | 3 | 0.000419324 |
| Gossypium hirsutum | D10 | 6 | CH_ghi_1160 | 3 | 3 | 0.000419324 |
| Gossypium raimondii | Chr11 | 6 | CH_gra_540 | 3 | 3 | 0.000216064 |
| Lotus japonicus | chr4 | 6 | CH_lja_341 | 5 | 22 | 0.0000192147 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_654 | 4 | 9 | 0.0000171085 |
| Magnolia biondii | Chr14 | 6 | CH_mbi_1174 | 3 | 6 | 0.000595761 |
| Olea europaea | chr9 | 6 | CH_oeu_100 | 5 | 7 | 0.00000000638683 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_274 | 5 | 14 | 0.000000177674 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_1035 | 3 | 3 | 0.0000591304 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_547 | 4 | 4 | 0.0000000601122 |
| Trochodendron aralioides | group16 | 6 | CH_tar_827 | 4 | 18 | 0.000450321 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |