Functional clusters
Information
- Type InterPro
- Description SRR1-like domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 5 | CH_amhyb_321 | 2 | 2 | 0.000252525 |
| Cannabis sativa | NC_044377.1 | 5 | CH_cansat_190 | 3 | 3 | 0.0000000646789 |
| Gossypium hirsutum | D10 | 5 | CH_ghi_500 | 3 | 8 | 0.000000239534 |
| Micromonas commoda | Chr_01 | 5 | CH_mco_29 | 2 | 2 | 0.000197961 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_186 | 4 | 9 | 0.000000000382092 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_121 | 4 | 10 | 0.0000000000554342 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_85 | 5 | 5 | 3.1038e-16 |
| Theobroma cacao | Chromosome_7 | 5 | CH_tca_620 | 2 | 2 | 0.000219716 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 6 | CH_amhyb_321 | 2 | 2 | 0.000252525 |
| Cannabis sativa | NC_044377.1 | 6 | CH_cansat_190 | 3 | 3 | 0.0000000646789 |
| Gossypium hirsutum | D10 | 6 | CH_ghi_500 | 3 | 8 | 0.000000239534 |
| Micromonas commoda | Chr_01 | 6 | CH_mco_29 | 2 | 2 | 0.000197961 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_186 | 4 | 9 | 0.000000000382092 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_121 | 4 | 10 | 0.0000000000554342 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_85 | 5 | 5 | 3.1038e-16 |
| Theobroma cacao | Chromosome_7 | 6 | CH_tca_620 | 2 | 2 | 0.000219716 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |