Functional clusters

Information

  • Type InterPro
  • Description N2227-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr2 5 CH_ath_370 2 2 0.0000286492
Cardamine hirsuta Chr4 5 CH_chi_99 4 4 0.0000000000009908
Capsella rubella scaffold_4 5 CH_cru_455 2 2 0.0000731154
Lonicera japonica GWHAAZE00000004 5 CH_lonja_877 2 3 0.000179657
Pisum sativum chr5LG3 5 CH_psa_517 2 3 0.000156486
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1239 2 2 0.000239192
Salix brachista GWHAAZH00000016 5 CH_sbr_231 4 26 0.0000000560456
Selenicereus undatus Scaffold_33676 5 CH_sun_193 2 2 0.0000726639
Tripterygium wilfordii NC_052246.1 5 CH_twi_345 2 2 0.0000557507
Arabidopsis thaliana Chr2 6 CH_ath_370 2 2 0.0000286492
Cardamine hirsuta Chr4 6 CH_chi_99 4 4 0.0000000000009908
Capsella rubella scaffold_4 6 CH_cru_455 2 2 0.0000731154
Lonicera japonica GWHAAZE00000004 6 CH_lonja_877 2 3 0.000179657
Pisum sativum chr5LG3 6 CH_psa_517 2 3 0.000156486
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1239 2 2 0.000239192
Salix brachista GWHAAZH00000016 6 CH_sbr_231 4 26 0.0000000560456
Selenicereus undatus Scaffold_33676 6 CH_sun_193 2 2 0.0000726639
Tripterygium wilfordii NC_052246.1 6 CH_twi_345 2 2 0.0000557507

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001