Functional clusters

Information

  • Type InterPro
  • Description Formiminotransferase, N-terminal subdomain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_587 2 2 0.000070497
Aquilegia oxysepala CHR01 5 CH_aox_400 2 3 0.000240587
Cicer arietinum L. Ca_LG1_v3 5 CH_car_214 2 2 0.0000778301
Corylus avellana 5 5 CH_cav_507 2 2 0.0000766695
Coffea canephora chr5 5 CH_ccan_399 2 6 0.0000638831
Citrus clementina scaffold_2 5 CH_ccl_651 2 2 0.000246093
Carya illinoinensis Chr04 5 CH_cil_674 2 2 0.000185948
Cucumis sativus L. chr6 5 CH_csa_383 2 3 0.000250417
Davidia involucrata GWHABJS00000001 5 CH_din_660 2 2 0.000300075
Erythranthe guttata scaffold_8 5 CH_egut_505 2 2 0.0000728147
Fragaria vesca Fvb6 5 CH_fve_547 2 2 0.0000589102
Gossypium hirsutum D02 5 CH_ghi_861 2 2 0.0000801047
Helianthus annuus HanXRQChr17 5 CH_han_319 3 3 0.00000000223995
Lupinus albus Lalb_Chr22 5 CH_lal_404 2 2 0.0000524824
Lotus japonicus chr3 5 CH_lja_407 2 2 0.0000715077
Lonicera japonica GWHAAZE00000001 5 CH_lonja_750 2 2 0.0000598874
Magnolia biondii Chr02 5 CH_mbi_1266 2 3 0.00087414
Malus domestica Chr17 5 CH_mdo_392 3 3 0.0000000215706
Manihot esculenta Chromosome13 5 CH_mes_500 2 2 0.0000610631
Medicago truncatula chr2 5 CH_mtr_405 3 3 0.00000000253218
Nelumbo nucifera chr1 5 CH_nnu_385 2 2 0.0000481684
Petunia axillaris Peaxi162Scf00132 5 CH_pax_131 3 3 0.00000000742514
Prunus persica Pp03 5 CH_ppe_597 2 2 0.0000745962
Pisum sativum chr5LG3 5 CH_psa_455 2 2 0.0000521635
Populus trichocarpa Chr13 5 CH_ptr_621 2 2 0.0001734
Quercus lobata 10 5 CH_qlo_686 3 4 0.0000000159933
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_973 2 2 0.0000398653
Salvia bowleyana GWHASIU00000001 5 CH_sbo_711 2 2 0.00045498
Salix brachista GWHAAZH00000013 5 CH_sbr_465 2 2 0.000063014
Sechium edule LG05 5 CH_sed_117 3 3 0.00000000763478
Solanum lycopersicum SL4.0ch07 5 CH_sly_589 2 2 0.0000586941
Solanum pennellii Spenn-ch07 5 CH_spe_552 2 2 0.000044479
Solanum tuberosum ST4.03ch07 5 CH_stu_595 2 2 0.0000512453
Trochodendron aralioides group0 5 CH_tar_510 2 2 0.0000600366
Theobroma cacao Chromosome_2 5 CH_tca_531 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_160 3 3 0.00000000859546
Vitis vinifera chr12 5 CH_vvi_512 2 2 0.000076063
Acer truncatum chr6 6 CH_acertr_587 2 2 0.000070497
Aquilegia oxysepala CHR01 6 CH_aox_400 2 3 0.000240587
Cicer arietinum L. Ca_LG1_v3 6 CH_car_214 2 2 0.0000778301
Corylus avellana 5 6 CH_cav_507 2 2 0.0000766695
Coffea canephora chr5 6 CH_ccan_399 2 6 0.0000638831
Citrus clementina scaffold_2 6 CH_ccl_651 2 2 0.000246093
Carya illinoinensis Chr04 6 CH_cil_674 2 2 0.000185948
Cucumis sativus L. chr6 6 CH_csa_383 2 3 0.000250417
Davidia involucrata GWHABJS00000001 6 CH_din_660 2 2 0.000300075
Erythranthe guttata scaffold_8 6 CH_egut_505 2 2 0.0000728147
Fragaria vesca Fvb6 6 CH_fve_547 2 2 0.0000589102
Gossypium hirsutum D02 6 CH_ghi_861 2 2 0.0000801047
Helianthus annuus HanXRQChr17 6 CH_han_319 3 3 0.00000000223995
Lupinus albus Lalb_Chr22 6 CH_lal_404 2 2 0.0000524824
Lotus japonicus chr3 6 CH_lja_407 2 2 0.0000715077
Lonicera japonica GWHAAZE00000001 6 CH_lonja_750 2 2 0.0000598874
Magnolia biondii Chr02 6 CH_mbi_1266 2 3 0.00087414
Malus domestica Chr17 6 CH_mdo_392 3 3 0.0000000215706
Manihot esculenta Chromosome13 6 CH_mes_500 2 2 0.0000610631
Medicago truncatula chr2 6 CH_mtr_405 3 3 0.00000000253218
Nelumbo nucifera chr1 6 CH_nnu_385 2 2 0.0000481684
Petunia axillaris Peaxi162Scf00132 6 CH_pax_131 3 3 0.00000000742514
Prunus persica Pp03 6 CH_ppe_597 2 2 0.0000745962
Pisum sativum chr5LG3 6 CH_psa_455 2 2 0.0000521635
Populus trichocarpa Chr13 6 CH_ptr_621 2 2 0.0001734
Quercus lobata 10 6 CH_qlo_686 3 4 0.0000000159933
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_973 2 2 0.0000398653
Salvia bowleyana GWHASIU00000001 6 CH_sbo_711 2 2 0.00045498
Salix brachista GWHAAZH00000013 6 CH_sbr_465 2 2 0.000063014
Sechium edule LG05 6 CH_sed_117 3 3 0.00000000763478
Solanum lycopersicum SL4.0ch07 6 CH_sly_589 2 2 0.0000586941
Solanum pennellii Spenn-ch07 6 CH_spe_552 2 2 0.000044479
Solanum tuberosum ST4.03ch07 6 CH_stu_595 2 2 0.0000512453
Trochodendron aralioides group0 6 CH_tar_510 2 2 0.0000600366
Theobroma cacao Chromosome_2 6 CH_tca_531 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_160 3 3 0.00000000859546
Vitis vinifera chr12 6 CH_vvi_512 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001