Functional clusters

Information

  • Type InterPro
  • Description Sucrose synthase, plant/cyanobacteria

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC08 5 CH_bca_235 4 4 0.000000000141982
Brassica carinata ChrB03 5 CH_bca_236 4 4 0.000000000141982
Cardamine hirsuta Chr5 5 CH_chi_317 3 3 0.000000602003
Eucalyptus grandis Chr03 5 CH_egr_445 5 9 0.000000000033268
Lonicera japonica GWHAAZE00000003 5 CH_lonja_557 3 4 0.00000180735
Malus domestica Chr13 5 CH_mdo_251 4 4 0.000000000223318
Nelumbo nucifera chr4 5 CH_nnu_316 3 7 0.0000102269
Quercus lobata 11 5 CH_qlo_999 3 5 0.00000223856
Solanum tuberosum ST4.03ch07 5 CH_stu_917 2 2 0.000768679
Brassica carinata ChrC08 6 CH_bca_235 4 4 0.000000000141982
Brassica carinata ChrB03 6 CH_bca_236 4 4 0.000000000141982
Cardamine hirsuta Chr5 6 CH_chi_317 3 3 0.000000602003
Eucalyptus grandis Chr03 6 CH_egr_445 5 9 0.000000000033268
Lonicera japonica GWHAAZE00000003 6 CH_lonja_557 3 4 0.00000180735
Malus domestica Chr13 6 CH_mdo_251 4 4 0.000000000223318
Nelumbo nucifera chr4 6 CH_nnu_316 3 7 0.0000102269
Quercus lobata 11 6 CH_qlo_999 3 5 0.00000223856
Solanum tuberosum ST4.03ch07 6 CH_stu_917 2 2 0.000768679

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001