Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF1645, plant
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold213 | 5 | CH_can_393 | 3 | 3 | 0.00000225218 |
| Daucus carota | DCARv2_Chr6 | 5 | CH_dca_196 | 4 | 6 | 0.0000000698099 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_197 | 4 | 6 | 0.0000000698099 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_370 | 3 | 3 | 0.00000205383 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 5 | CH_eca_371 | 3 | 3 | 0.00000205383 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_165 | 5 | 5 | 0.000000000000562809 |
| Lactuca sativa | Lsat_1_v8_lg_0 | 5 | CH_lsa_380 | 4 | 8 | 0.000000302531 |
| Lactuca sativa | Lsat_1_v8_lg_0 | 5 | CH_lsa_514 | 3 | 3 | 0.00000802141 |
| Olea europaea | chr14 | 5 | CH_oeu_285 | 3 | 4 | 0.0000345874 |
| Petunia axillaris | Peaxi162Scf00700 | 5 | CH_pax_113 | 4 | 4 | 0.000000000517213 |
| Rhododendron simsii | chr08 | 5 | CH_rsi_507 | 3 | 3 | 0.00000227373 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_1080 | 3 | 3 | 0.000000124594 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_241 | 3 | 3 | 0.00000045335 |
| Capsicum annuum | PGAv.1.6.scaffold213 | 6 | CH_can_393 | 3 | 3 | 0.00000225218 |
| Daucus carota | DCARv2_Chr6 | 6 | CH_dca_196 | 4 | 6 | 0.0000000698099 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_197 | 4 | 6 | 0.0000000698099 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_370 | 3 | 3 | 0.00000205383 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 6 | CH_eca_371 | 3 | 3 | 0.00000205383 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_165 | 5 | 5 | 0.000000000000562809 |
| Lactuca sativa | Lsat_1_v8_lg_0 | 6 | CH_lsa_380 | 4 | 8 | 0.000000302531 |
| Lactuca sativa | Lsat_1_v8_lg_0 | 6 | CH_lsa_514 | 3 | 3 | 0.00000802141 |
| Olea europaea | chr14 | 6 | CH_oeu_285 | 3 | 4 | 0.0000345874 |
| Petunia axillaris | Peaxi162Scf00700 | 6 | CH_pax_113 | 4 | 4 | 0.000000000517213 |
| Rhododendron simsii | chr08 | 6 | CH_rsi_507 | 3 | 3 | 0.00000227373 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_1080 | 3 | 3 | 0.000000124594 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_241 | 3 | 3 | 0.00000045335 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |