Functional clusters

Information

  • Type InterPro
  • Description Protein of unknown function DUF1639

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_911 3 7 0.0000724011
Brassica carinata ChrB03 5 CH_bca_1182 3 4 0.0000292177
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_411 3 5 0.000004982
Lonicera japonica GWHAAZE00000007 5 CH_lonja_628 3 5 0.00000887314
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_437 3 3 0.00000144258
Oryza sativa ssp. japonica chr05 5 CH_osa_322 3 4 0.00000140556
Populus trichocarpa Chr14 5 CH_ptr_414 3 3 0.0000022802
Rhododendron simsii chr09 5 CH_rsi_1032 2 2 0.000967961
Sequoiadendron giganteum chr4 5 CH_sgi_468 5 7 0.000000000000702393
Zea mays 6 5 CH_zma_289 3 3 0.0000176281
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_911 3 7 0.0000724011
Brassica carinata ChrB03 6 CH_bca_1182 3 4 0.0000292177
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_411 3 5 0.000004982
Lonicera japonica GWHAAZE00000007 6 CH_lonja_628 3 5 0.00000887314
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_437 3 3 0.00000144258
Oryza sativa ssp. japonica chr05 6 CH_osa_322 3 4 0.00000140556
Populus trichocarpa Chr14 6 CH_ptr_414 3 3 0.0000022802
Rhododendron simsii chr09 6 CH_rsi_1032 2 2 0.000967961
Sequoiadendron giganteum chr4 6 CH_sgi_468 5 7 0.000000000000702393
Zea mays 6 6 CH_zma_289 3 3 0.0000176281

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001