Functional clusters

Information

  • Type InterPro
  • Description CAP160

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_943 2 2 0.000089815
Camellia sinensis var. sinensis Chr1 5 CH_camsi_1524 2 7 0.000962839
Cardamine hirsuta Chr8 5 CH_chi_614 2 2 0.000207361
Eutrema salsugineum scaffold_2 5 CH_esa_413 2 2 0.00022845
Fragaria vesca Fvb7 5 CH_fve_613 2 3 0.000176725
Magnolia biondii Chr18 5 CH_mbi_1116 2 5 0.000485625
Quercus lobata 9 5 CH_qlo_1256 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1304 2 5 0.000398629
Schrenkiella parvula ch6-6 5 CH_spa_350 2 3 0.000708559
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_943 2 2 0.000089815
Camellia sinensis var. sinensis Chr1 6 CH_camsi_1524 2 7 0.000962839
Cardamine hirsuta Chr8 6 CH_chi_614 2 2 0.000207361
Eutrema salsugineum scaffold_2 6 CH_esa_413 2 2 0.00022845
Fragaria vesca Fvb7 6 CH_fve_613 2 3 0.000176725
Magnolia biondii Chr18 6 CH_mbi_1116 2 5 0.000485625
Quercus lobata 9 6 CH_qlo_1256 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1304 2 5 0.000398629
Schrenkiella parvula ch6-6 6 CH_spa_350 2 3 0.000708559

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001