Functional clusters

Information

  • Type InterPro
  • Description CALMODULIN-BINDING PROTEIN60

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 5 CH_acertr_939 3 21 0.000553577
Actinidia chinensis Lachesis_group13 5 CH_ach_231 3 4 0.0000235387
Actinidia chinensis Lachesis_group1 5 CH_ach_412 3 7 0.000205721
Avicennia marina ScioBoG_3703_HRSCAF_3719 5 CH_ama_136 3 6 0.00010135
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 5 CH_amhyb_143 3 3 0.00000175372
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 5 CH_arhy_255 5 6 0.00000000000355219
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 5 CH_arhy_374 4 4 0.00000000164834
Brassica carinata ChrB07 5 CH_bca_841 3 3 0.0000020049
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_81 6 26 0.0000000000185319
Camellia sinensis var. sinensis Chr15 5 CH_camsi_17 11 21 3.98035e-28
Capsicum annuum PGAv.1.6.scaffold853 5 CH_can_245 4 7 0.0000000124238
Coffea canephora chr4 5 CH_ccan_38 6 49 0.000000000000356366
Carya illinoinensis Chr15 5 CH_cil_230 4 4 0.000000000510836
Citrullus lanatus CG_Chr03 5 CH_cla_9 9 22 2.48706e-19
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_429 3 3 0.00000122584
Chenopodium quinoa C_Quinoa_Scaffold_3820 5 CH_cqu_430 3 3 0.00000122584
Cucumis sativus L. chr1 5 CH_csa_18 11 24 2.67657e-25
Cucumis sativus L. chr5 5 CH_csa_279 3 3 0.0000119162
Daucus carota DCARv2_Chr5 5 CH_dca_266 3 3 0.00000134234
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_487 3 6 0.0000274666
Eucalyptus grandis Chr05 5 CH_egr_1307 3 5 0.000468824
Eucalyptus grandis Chr05 5 CH_egr_221 8 13 5.84656e-17
Eucalyptus grandis Chr01 5 CH_egr_441 6 11 0.0000000000231982
Eucalyptus grandis Chr05 5 CH_egr_558 5 8 0.00000000283064
Glycine max Gm03 5 CH_gma_423 3 3 0.000002094
Lactuca sativa Lsat_1_v8_lg_1 5 CH_lsa_297 4 6 0.0000000186897
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_532 3 4 0.0000129316
Magnolia biondii Chr14 5 CH_mbi_435 4 20 0.000000220413
Medicago truncatula chr6 5 CH_mtr_655 3 3 0.000000724204
Medicago truncatula chr7 5 CH_mtr_752 3 4 0.00000289631
Olea europaea chr18 5 CH_oeu_233 3 4 0.00000622151
Olea europaea scaffold398 5 CH_oeu_279 3 6 0.0000310922
Oryza sativa ssp. japonica chr11 5 CH_osa_134 6 23 0.0000000000359677
Petunia axillaris Peaxi162Scf00017 5 CH_pax_59 5 6 0.00000000000220716
Punica granatum NC_045132.1 5 CH_pgr_126 5 7 0.000000000167841
Phaseolus vulgaris Chr01 5 CH_pvu_303 3 3 0.000000971718
Quercus lobata 10 5 CH_qlo_1375 3 13 0.000137004
Rhododendron simsii chr08 5 CH_rsi_289 4 4 0.00000000110051
Salvia bowleyana GWHASIU00000003 5 CH_sbo_164 5 10 0.00000000000641028
Sechium edule LG04 5 CH_sed_36 6 6 2.08193e-16
Sequoiadendron giganteum chr1 5 CH_sgi_2218 2 4 0.000292277
Solanum lycopersicum SL4.0ch03 5 CH_sly_78 6 7 1.01385e-16
Solanum pennellii Spenn-ch03 5 CH_spe_46 6 7 2.53377e-17
Solanum tuberosum ST4.03ch03 5 CH_stu_88 6 8 3.82016e-16
Selenicereus undatus Scaffold_33680 5 CH_sun_69 4 7 0.0000000199272
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_108 4 4 0.000000000273295
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_86 5 6 0.0000000000100742
Vigna mungo CM024070.1 5 CH_vmu_91 4 4 0.000000000400636
Vitis vinifera chr17 5 CH_vvi_355 3 3 0.00000104144
Acer truncatum chr2 6 CH_acertr_939 3 21 0.000553577
Actinidia chinensis Lachesis_group13 6 CH_ach_231 3 4 0.0000235387
Actinidia chinensis Lachesis_group1 6 CH_ach_412 3 7 0.000205721
Avicennia marina ScioBoG_3703_HRSCAF_3719 6 CH_ama_136 3 6 0.00010135
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 6 CH_amhyb_143 3 3 0.00000175372
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 6 CH_arhy_255 5 6 0.00000000000355219
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 6 CH_arhy_374 4 4 0.00000000164834
Brassica carinata ChrB07 6 CH_bca_841 3 3 0.0000020049
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_81 6 26 0.0000000000185319
Camellia sinensis var. sinensis Chr15 6 CH_camsi_17 11 21 3.98035e-28
Capsicum annuum PGAv.1.6.scaffold853 6 CH_can_245 4 7 0.0000000124238
Coffea canephora chr4 6 CH_ccan_38 6 49 0.000000000000356366
Carya illinoinensis Chr15 6 CH_cil_230 4 4 0.000000000510836
Citrullus lanatus CG_Chr03 6 CH_cla_9 9 22 2.48706e-19
Cucumis melo chr02 6 CH_cme_32 8 21 4.84283e-19
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_429 3 3 0.00000122584
Chenopodium quinoa C_Quinoa_Scaffold_3820 6 CH_cqu_430 3 3 0.00000122584
Cucumis sativus L. chr1 6 CH_csa_18 11 24 2.67657e-25
Cucumis sativus L. chr5 6 CH_csa_279 3 3 0.0000119162
Daucus carota DCARv2_Chr5 6 CH_dca_266 3 3 0.00000134234
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_487 3 6 0.0000274666
Eucalyptus grandis Chr05 6 CH_egr_1307 3 5 0.000468824
Eucalyptus grandis Chr05 6 CH_egr_221 8 13 5.84656e-17
Eucalyptus grandis Chr01 6 CH_egr_441 6 11 0.0000000000231982
Eucalyptus grandis Chr05 6 CH_egr_558 5 8 0.00000000283064
Glycine max Gm03 6 CH_gma_423 3 3 0.000002094
Lactuca sativa Lsat_1_v8_lg_1 6 CH_lsa_297 4 6 0.0000000186897
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_532 3 4 0.0000129316
Magnolia biondii Chr14 6 CH_mbi_435 4 20 0.000000220413
Medicago truncatula chr6 6 CH_mtr_655 3 3 0.000000724204
Medicago truncatula chr7 6 CH_mtr_752 3 4 0.00000289631
Olea europaea chr18 6 CH_oeu_233 3 4 0.00000622151
Olea europaea scaffold398 6 CH_oeu_279 3 6 0.0000310922
Oryza sativa ssp. japonica chr11 6 CH_osa_134 6 23 0.0000000000359677
Petunia axillaris Peaxi162Scf00017 6 CH_pax_59 5 6 0.00000000000220716
Punica granatum NC_045132.1 6 CH_pgr_126 5 7 0.000000000167841
Phaseolus vulgaris Chr01 6 CH_pvu_303 3 3 0.000000971718
Quercus lobata 10 6 CH_qlo_1375 3 13 0.000137004
Rhododendron simsii chr08 6 CH_rsi_289 4 4 0.00000000110051
Salvia bowleyana GWHASIU00000003 6 CH_sbo_164 5 10 0.00000000000641028
Sechium edule LG04 6 CH_sed_36 6 6 2.08193e-16
Sequoiadendron giganteum chr1 6 CH_sgi_2218 2 4 0.000292277
Solanum lycopersicum SL4.0ch03 6 CH_sly_78 6 7 1.01385e-16
Solanum pennellii Spenn-ch03 6 CH_spe_46 6 7 2.53377e-17
Solanum tuberosum ST4.03ch03 6 CH_stu_88 6 8 3.82016e-16
Selenicereus undatus Scaffold_33680 6 CH_sun_69 4 7 0.0000000199272
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_108 4 4 0.000000000273295
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_86 5 6 0.0000000000100742
Vigna mungo CM024070.1 6 CH_vmu_91 4 4 0.000000000400636
Vitis vinifera chr17 6 CH_vvi_355 3 3 0.00000104144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001