Functional clusters
Information
- Type InterPro
- Description PRIB5
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_191 | 3 | 4 | 0.0000000261395 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_70 | 4 | 5 | 0.000000000000352729 |
| Brassica napus | A04 | 5 | CH_bna_156 | 4 | 4 | 0.00000000000402905 |
| Brassica napus | C04 | 5 | CH_bna_211 | 4 | 7 | 0.000000000140994 |
| Brassica oleracea | C4 | 5 | CH_bol_175 | 3 | 4 | 0.00000000641031 |
| Brassica rapa | A04 | 5 | CH_bra_44 | 4 | 4 | 0.00000000000118698 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_279 | 3 | 7 | 0.0000002508 |
| Citrullus lanatus | CG_Chr05 | 5 | CH_cla_200 | 2 | 2 | 0.0000887115 |
| Capsella rubella | scaffold_5 | 5 | CH_cru_181 | 3 | 3 | 0.0000000080191 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_226 | 5 | 5 | 8.80189e-17 |
| Eutrema salsugineum | scaffold_19 | 5 | CH_esa_132 | 3 | 3 | 0.00000000869853 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_530 | 2 | 2 | 0.00015649 |
| Schrenkiella parvula | ch5-1 | 5 | CH_spa_91 | 3 | 3 | 0.0000000371957 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_191 | 3 | 4 | 0.0000000261395 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_70 | 4 | 5 | 0.000000000000352729 |
| Brassica napus | A04 | 6 | CH_bna_156 | 4 | 4 | 0.00000000000402905 |
| Brassica napus | C04 | 6 | CH_bna_211 | 4 | 7 | 0.000000000140994 |
| Brassica oleracea | C4 | 6 | CH_bol_175 | 3 | 4 | 0.00000000641031 |
| Brassica rapa | A04 | 6 | CH_bra_44 | 4 | 4 | 0.00000000000118698 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_279 | 3 | 7 | 0.0000002508 |
| Citrullus lanatus | CG_Chr05 | 6 | CH_cla_200 | 2 | 2 | 0.0000887115 |
| Cucumis melo | chr06 | 6 | CH_cme_291 | 2 | 2 | 0.0000667111 |
| Capsella rubella | scaffold_5 | 6 | CH_cru_181 | 3 | 3 | 0.0000000080191 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_226 | 5 | 5 | 8.80189e-17 |
| Eutrema salsugineum | scaffold_19 | 6 | CH_esa_132 | 3 | 3 | 0.00000000869853 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_530 | 2 | 2 | 0.00015649 |
| Schrenkiella parvula | ch5-1 | 6 | CH_spa_91 | 3 | 3 | 0.0000000371957 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |