Functional clusters

Information

  • Type InterPro
  • Description 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR01 5 CH_aox_421 2 2 0.000240597
Arabidopsis thaliana Chr4 5 CH_ath_369 2 2 0.0000286492
Beta vulgaris Chr8_EL10_PGA_scaffold4 5 CH_bvu_136 3 3 0.0000000102821
Camellia sinensis var. sinensis Chr8 5 CH_camsi_474 3 6 0.0000000630768
Cannabis sativa NC_044378.1 5 CH_cansat_401 2 2 0.0000656642
Carpinus fangiana Cfa01 5 CH_cfa_410 2 2 0.0000757346
Cardamine hirsuta Chr7 5 CH_chi_494 2 2 0.0000691204
Carya illinoinensis Chr09 5 CH_cil_572 2 2 0.0000619828
Chenopodium quinoa C_Quinoa_Scaffold_1759 5 CH_cqu_424 3 7 0.00000117841
Chlamydomonas reinhardtii chromosome_10 5 CH_cre_117 2 2 0.000113733
Capsella rubella scaffold_7 5 CH_cru_182 3 3 0.0000000080191
Eucalyptus grandis Chr05 5 CH_egr_394 4 5 0.00000000000300743
Eutrema salsugineum scaffold_1 5 CH_esa_134 3 3 0.00000000869853
Fragaria vesca Fvb6 5 CH_fve_340 5 54 0.000000224063
Malus domestica Chr15 5 CH_mdo_372 4 11 0.000000011329
Quercus lobata 5 5 CH_qlo_1456 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_571 5 46 0.000000112493
Simmondsia chinensis GWHAASQ00000005 5 CH_sci_291 2 2 0.0000851426
Sechium edule LG10 5 CH_sed_400 2 2 0.000214026
Schrenkiella parvula ch7-4 5 CH_spa_238 2 2 0.000078734
Aquilegia oxysepala CHR01 6 CH_aox_421 2 2 0.000240597
Arabidopsis thaliana Chr4 6 CH_ath_369 2 2 0.0000286492
Beta vulgaris Chr8_EL10_PGA_scaffold4 6 CH_bvu_136 3 3 0.0000000102821
Camellia sinensis var. sinensis Chr8 6 CH_camsi_474 3 6 0.0000000630768
Cannabis sativa NC_044378.1 6 CH_cansat_401 2 2 0.0000656642
Carpinus fangiana Cfa01 6 CH_cfa_410 2 2 0.0000757346
Cardamine hirsuta Chr7 6 CH_chi_494 2 2 0.0000691204
Carya illinoinensis Chr09 6 CH_cil_572 2 2 0.0000619828
Chenopodium quinoa C_Quinoa_Scaffold_1759 6 CH_cqu_424 3 7 0.00000117841
Chlamydomonas reinhardtii chromosome_10 6 CH_cre_117 2 2 0.000113733
Capsella rubella scaffold_7 6 CH_cru_182 3 3 0.0000000080191
Eucalyptus grandis Chr05 6 CH_egr_394 4 5 0.00000000000300743
Eutrema salsugineum scaffold_1 6 CH_esa_134 3 3 0.00000000869853
Fragaria vesca Fvb6 6 CH_fve_340 5 54 0.000000224063
Malus domestica Chr15 6 CH_mdo_372 4 11 0.000000011329
Quercus lobata 5 6 CH_qlo_1456 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_571 5 46 0.000000112493
Simmondsia chinensis GWHAASQ00000005 6 CH_sci_291 2 2 0.0000851426
Sechium edule LG10 6 CH_sed_400 2 2 0.000214026
Schrenkiella parvula ch7-4 6 CH_spa_238 2 2 0.000078734

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001