Functional clusters

Information

  • Type InterPro
  • Description Nucleic acid-binding, OB-fold

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 5 CH_aly_412 6 17 0.0000578834
Arabidopsis lyrata scaffold_4 5 CH_aly_466 4 4 0.0000929473
Capsella rubella scaffold_1 5 CH_cru_156 6 6 0.000000000854168
Capsella rubella scaffold_8 5 CH_cru_507 5 13 0.000191849
Daucus carota DCARv2_B9 5 CH_dca_30 15 29 8.56193e-17
Daucus carota DCARv2_Chr5 5 CH_dca_566 5 7 0.000237361
Daucus carota DCARv2_Chr4 5 CH_dca_573 7 22 0.000275351
Daucus carota DCARv2_Chr8 5 CH_dca_659 9 51 0.000587291
Sapria himalayana scaffold45_4472430 5 CH_shi_560 3 4 0.000855758
Arabidopsis lyrata scaffold_2 6 CH_aly_412 6 17 0.0000578834
Arabidopsis lyrata scaffold_4 6 CH_aly_466 4 4 0.0000929473
Capsella rubella scaffold_1 6 CH_cru_156 6 6 0.000000000854168
Capsella rubella scaffold_8 6 CH_cru_507 5 13 0.000191849
Daucus carota DCARv2_B9 6 CH_dca_30 15 29 8.56193e-17
Daucus carota DCARv2_Chr5 6 CH_dca_566 5 7 0.000237361
Daucus carota DCARv2_Chr4 6 CH_dca_573 7 22 0.000275351
Daucus carota DCARv2_Chr8 6 CH_dca_659 9 51 0.000587291
Sapria himalayana scaffold45_4472430 6 CH_shi_560 3 4 0.000855758

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001