Functional clusters

Information

  • Type InterPro
  • Description Beta-lactamase/transpeptidase-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_4 9 10 2.3313e-30
Lupinus albus Lalb_Chr22 5 CH_lal_518 2 2 0.000157447
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_22 9 13 1.0868e-26
Olea europaea chr8 5 CH_oeu_333 2 2 0.0000533789
Salix brachista GWHAAZH00000018 5 CH_sbr_220 5 68 0.0000000257542
Sequoiadendron giganteum chr2 5 CH_sgi_1411 3 4 0.00000518195
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_454 2 2 0.0000929238
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_4 9 10 2.3313e-30
Lupinus albus Lalb_Chr22 6 CH_lal_518 2 2 0.000157447
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_22 9 13 1.0868e-26
Olea europaea chr8 6 CH_oeu_333 2 2 0.0000533789
Salix brachista GWHAAZH00000018 6 CH_sbr_220 5 68 0.0000000257542
Sequoiadendron giganteum chr2 6 CH_sgi_1411 3 4 0.00000518195
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_454 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001