Functional clusters
Information
- Type InterPro
- Description Chalcone/stilbene synthase, C-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Chenopodium quinoa | C_Quinoa_Scaffold_3458 | 5 | CH_cqu_287 | 4 | 5 | 0.0000000378819 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1214 | 5 | CH_cqu_558 | 3 | 3 | 0.0000123055 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1699 | 5 | CH_cqu_559 | 3 | 3 | 0.0000123055 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2888 | 5 | CH_cqu_646 | 3 | 4 | 0.0000491981 |
| Erythranthe guttata | scaffold_7 | 5 | CH_egut_152 | 4 | 4 | 0.0000000000405409 |
| Lotus japonicus | Contig00222 | 5 | CH_lja_129 | 6 | 53 | 0.0000000175977 |
| Malus domestica | Chr04 | 5 | CH_mdo_757 | 3 | 5 | 0.0000146616 |
| Marchantia polymorpha | scaffold_70 | 5 | CH_mpo_23 | 7 | 13 | 0.0000000000000598722 |
| Marchantia polymorpha | scaffold_9 | 5 | CH_mpo_89 | 4 | 7 | 0.00000124937 |
| Oryza sativa ssp. japonica | chr10 | 5 | CH_osa_441 | 5 | 64 | 0.0000284347 |
| Oryza sativa ssp. japonica | chr05 | 5 | CH_osa_457 | 3 | 5 | 0.0000434907 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_541 | 3 | 5 | 0.000108674 |
| Physcomitrium patens | Chr19 | 5 | CH_ppa_340 | 3 | 6 | 0.000505265 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3458 | 6 | CH_cqu_287 | 4 | 5 | 0.0000000378819 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1214 | 6 | CH_cqu_558 | 3 | 3 | 0.0000123055 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1699 | 6 | CH_cqu_559 | 3 | 3 | 0.0000123055 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2888 | 6 | CH_cqu_646 | 3 | 4 | 0.0000491981 |
| Erythranthe guttata | scaffold_7 | 6 | CH_egut_152 | 4 | 4 | 0.0000000000405409 |
| Lotus japonicus | Contig00222 | 6 | CH_lja_129 | 6 | 53 | 0.0000000175977 |
| Malus domestica | Chr04 | 6 | CH_mdo_757 | 3 | 5 | 0.0000146616 |
| Marchantia polymorpha | scaffold_70 | 6 | CH_mpo_23 | 7 | 13 | 0.0000000000000598722 |
| Marchantia polymorpha | scaffold_9 | 6 | CH_mpo_89 | 4 | 7 | 0.00000124937 |
| Oryza sativa ssp. japonica | chr10 | 6 | CH_osa_441 | 5 | 64 | 0.0000284347 |
| Oryza sativa ssp. japonica | chr05 | 6 | CH_osa_457 | 3 | 5 | 0.0000434907 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_541 | 3 | 5 | 0.000108674 |
| Physcomitrium patens | Chr19 | 6 | CH_ppa_340 | 3 | 6 | 0.000505265 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |