Functional clusters
Information
- Type InterPro
- Description Glucose-methanol-choline oxidoreductase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-3 | 5 | CH_aar_183 | 3 | 4 | 0.000000998703 |
| Arabidopsis lyrata | scaffold_8 | 5 | CH_aly_310 | 3 | 4 | 0.00000146363 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_152 | 3 | 3 | 0.000000192964 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_641 | 2 | 2 | 0.000802177 |
| Brassica carinata | ChrB01 | 5 | CH_bca_1176 | 3 | 6 | 0.0000277315 |
| Brassica napus | C03 | 5 | CH_bna_701 | 3 | 4 | 0.00000366052 |
| Brassica oleracea | C3 | 5 | CH_bol_276 | 3 | 3 | 0.000000264429 |
| Cardamine hirsuta | Chr8 | 5 | CH_chi_325 | 3 | 4 | 0.0000010032 |
| Carica papaya | supercontig_128 | 5 | CH_cpa_574 | 2 | 2 | 0.000570396 |
| Capsella rubella | scaffold_5 | 5 | CH_cru_297 | 3 | 3 | 0.000000962292 |
| Capsella rubella | scaffold_8 | 5 | CH_cru_338 | 3 | 4 | 0.00000384829 |
| Cucumis sativus L. | chr2 | 5 | CH_csa_16 | 9 | 11 | 4.04736e-26 |
| Helianthus annuus | HanXRQChr03 | 5 | CH_han_261 | 5 | 9 | 0.000000000249865 |
| Malus domestica | Chr00 | 5 | CH_mdo_332 | 4 | 6 | 0.0000000058381 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_949 | 3 | 8 | 0.0000381483 |
| Schrenkiella parvula | ch6-6 | 5 | CH_spa_144 | 3 | 3 | 0.000000781109 |
| Aethionema arabicum | LG-3 | 6 | CH_aar_183 | 3 | 4 | 0.000000998703 |
| Arabidopsis lyrata | scaffold_8 | 6 | CH_aly_310 | 3 | 4 | 0.00000146363 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_152 | 3 | 3 | 0.000000192964 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_641 | 2 | 2 | 0.000802177 |
| Brassica carinata | ChrB01 | 6 | CH_bca_1176 | 3 | 6 | 0.0000277315 |
| Brassica napus | C03 | 6 | CH_bna_701 | 3 | 4 | 0.00000366052 |
| Brassica oleracea | C3 | 6 | CH_bol_276 | 3 | 3 | 0.000000264429 |
| Cardamine hirsuta | Chr8 | 6 | CH_chi_325 | 3 | 4 | 0.0000010032 |
| Cucumis melo | chr05 | 6 | CH_cme_17 | 10 | 28 | 2.43255e-24 |
| Carica papaya | supercontig_128 | 6 | CH_cpa_574 | 2 | 2 | 0.000570396 |
| Capsella rubella | scaffold_5 | 6 | CH_cru_297 | 3 | 3 | 0.000000962292 |
| Capsella rubella | scaffold_8 | 6 | CH_cru_338 | 3 | 4 | 0.00000384829 |
| Cucumis sativus L. | chr2 | 6 | CH_csa_16 | 9 | 11 | 4.04736e-26 |
| Helianthus annuus | HanXRQChr03 | 6 | CH_han_261 | 5 | 9 | 0.000000000249865 |
| Malus domestica | Chr00 | 6 | CH_mdo_332 | 4 | 6 | 0.0000000058381 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_949 | 3 | 8 | 0.0000381483 |
| Schrenkiella parvula | ch6-6 | 6 | CH_spa_144 | 3 | 3 | 0.000000781109 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |