Functional clusters

Information

  • Type InterPro
  • Description ATPase, dynein-related, AAA domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00067 5 CH_atr_157 3 3 0.00000000946662
Brassica napus C02 5 CH_bna_167 4 7 0.0000000000100719
Brassica oleracea C2 5 CH_bol_211 3 6 0.0000000320505
Chara braunii BFEA01000089 5 CH_cbr_186 2 2 0.0000719269
Ceratophyllum demersum 10 5 CH_cde_215 2 2 0.0000789796
Carica papaya supercontig_30 5 CH_cpa_161 3 6 0.000000271101
Lupinus albus Lalb_Chr20 5 CH_lal_136 3 3 0.00000000413171
Nicotiana tabacum Nitab4.5_0000433 5 CH_nta_208 2 2 0.000109727
Sequoiadendron giganteum chr2 5 CH_sgi_902 3 4 0.000000014239
Schrenkiella parvula ch5-6 5 CH_spa_237 2 2 0.000078734
Selenicereus undatus Scaffold_19641 5 CH_sun_192 2 2 0.0000726639
Vigna mungo CM024077.1 5 CH_vmu_596 2 2 0.000646141
Amborella trichopoda AmTr_v1.0_scaffold00067 6 CH_atr_157 3 3 0.00000000946662
Brassica napus C02 6 CH_bna_167 4 7 0.0000000000100719
Brassica oleracea C2 6 CH_bol_211 3 6 0.0000000320505
Chara braunii BFEA01000089 6 CH_cbr_186 2 2 0.0000719269
Ceratophyllum demersum 10 6 CH_cde_215 2 2 0.0000789796
Carica papaya supercontig_30 6 CH_cpa_161 3 6 0.000000271101
Lupinus albus Lalb_Chr20 6 CH_lal_136 3 3 0.00000000413171
Nicotiana tabacum Nitab4.5_0000433 6 CH_nta_208 2 2 0.000109727
Sequoiadendron giganteum chr2 6 CH_sgi_902 3 4 0.000000014239
Schrenkiella parvula ch5-6 6 CH_spa_237 2 2 0.000078734
Selenicereus undatus Scaffold_19641 6 CH_sun_192 2 2 0.0000726639
Vigna mungo CM024077.1 6 CH_vmu_596 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001