Functional clusters

Information

  • Type InterPro
  • Description 2-oxoglutarate dehydrogenase E1 component

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 5 CH_aag_333 2 2 0.000481541
Chara braunii BFEA01000023 5 CH_cbr_185 2 2 0.0000719269
Coffea canephora chr2 5 CH_ccan_104 3 8 0.0000000015236
Davidia involucrata GWHABJS00000004 5 CH_din_555 2 2 0.000150038
Durio zibethinus NW_019167926.1 5 CH_dzi_442 2 2 0.000139047
Fragaria vesca Fvb7 5 CH_fve_69 6 22 0.00000000000000119089
Gossypium hirsutum D04 5 CH_ghi_1119 2 2 0.000400523
Gossypium raimondii Chr12 5 CH_gra_510 2 2 0.000160832
Lupinus albus Lalb_Chr10 5 CH_lal_612 2 2 0.000314895
Malus domestica Chr07 5 CH_mdo_1408 2 2 0.000796344
Malus domestica Chr02 5 CH_mdo_173 4 4 0.0000000000057261
Manihot esculenta Chromosome10 5 CH_mes_584 2 2 0.000183189
Prunus persica Pp02 5 CH_ppe_595 2 2 0.0000745962
Simmondsia chinensis GWHAASQ00000020 5 CH_sci_396 2 2 0.000255428
Sequoiadendron giganteum chr4 5 CH_sgi_2383 2 3 0.000438418
Trochodendron aralioides group7 5 CH_tar_958 2 2 0.000900549
Theobroma cacao Chromosome_10 5 CH_tca_530 2 2 0.0000732386
Vanilla planifolia CM028155.1 5 CH_vpl_539 2 2 0.000221664
Anthoceros agrestis Sc2ySwM_117 6 CH_aag_333 2 2 0.000481541
Chara braunii BFEA01000023 6 CH_cbr_185 2 2 0.0000719269
Coffea canephora chr2 6 CH_ccan_104 3 8 0.0000000015236
Davidia involucrata GWHABJS00000004 6 CH_din_555 2 2 0.000150038
Durio zibethinus NW_019167926.1 6 CH_dzi_442 2 2 0.000139047
Fragaria x ananassa Fvb7-2 6 CH_fan_521 3 7 0.00000296516
Fragaria x ananassa Fvb7-4 6 CH_fan_601 3 9 0.00000711546
Fragaria vesca Fvb7 6 CH_fve_69 6 22 0.00000000000000119089
Gossypium hirsutum D04 6 CH_ghi_1119 2 2 0.000400523
Gossypium raimondii Chr12 6 CH_gra_510 2 2 0.000160832
Lupinus albus Lalb_Chr10 6 CH_lal_612 2 2 0.000314895
Malus domestica Chr07 6 CH_mdo_1408 2 2 0.000796344
Malus domestica Chr02 6 CH_mdo_173 4 4 0.0000000000057261
Manihot esculenta Chromosome10 6 CH_mes_584 2 2 0.000183189
Prunus persica Pp02 6 CH_ppe_595 2 2 0.0000745962
Simmondsia chinensis GWHAASQ00000020 6 CH_sci_396 2 2 0.000255428
Sequoiadendron giganteum chr4 6 CH_sgi_2383 2 3 0.000438418
Trochodendron aralioides group7 6 CH_tar_958 2 2 0.000900549
Theobroma cacao Chromosome_10 6 CH_tca_530 2 2 0.0000732386
Vanilla planifolia CM028155.1 6 CH_vpl_539 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001