Functional clusters

Information

  • Type InterPro
  • Description Glutamate--cysteine ligase, plant-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 5 CH_aly_511 2 2 0.000198013
Amborella trichopoda AmTr_v1.0_scaffold00041 5 CH_atr_472 2 3 0.000238322
Brassica carinata Contig1132 5 CH_bca_1772 2 2 0.000448905
Brassica napus A03 5 CH_bna_1352 2 2 0.000519726
Brassica rapa A03 5 CH_bra_451 2 2 0.000257588
Camellia sinensis var. sinensis Chr12 5 CH_camsi_1166 2 4 0.000275116
Carpinus fangiana Cfa05 5 CH_cfa_198 3 4 0.0000000344144
Malus domestica Chr06 5 CH_mdo_1169 2 3 0.00034128
Prunus persica Pp05 5 CH_ppe_571 2 2 0.0000745962
Arabidopsis lyrata scaffold_7 6 CH_aly_511 2 2 0.000198013
Amborella trichopoda AmTr_v1.0_scaffold00041 6 CH_atr_472 2 3 0.000238322
Brassica carinata Contig1132 6 CH_bca_1772 2 2 0.000448905
Brassica napus A03 6 CH_bna_1352 2 2 0.000519726
Brassica rapa A03 6 CH_bra_451 2 2 0.000257588
Camellia sinensis var. sinensis Chr12 6 CH_camsi_1166 2 4 0.000275116
Carpinus fangiana Cfa05 6 CH_cfa_198 3 4 0.0000000344144
Malus domestica Chr06 6 CH_mdo_1169 2 3 0.00034128
Prunus persica Pp05 6 CH_ppe_571 2 2 0.0000745962

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001