Functional clusters

Information

  • Type InterPro
  • Description Nucleoporin Nup85-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group14 5 CH_ach_353 2 2 0.000162964
Brassica carinata ChrC09 5 CH_bca_1134 2 2 0.0000213764
Chara braunii BFEA01000069 5 CH_cbr_67 3 4 0.0000000310409
Hydrangea macrophylla Hma1.2p1_0049F.1 5 CH_hma_388 2 2 0.000111086
Salix brachista GWHAAZH00000018 5 CH_sbr_463 2 2 0.000063014
Sequoiadendron giganteum chr7 5 CH_sgi_792 3 3 0.00000000355983
Selaginella moellendorffii scaffold_31 5 CH_smo_115 3 6 0.00000104596
Utricularia gibba unitig_578 5 CH_ugi_153 2 2 0.0000820479
Vigna mungo CM024073.1 5 CH_vmu_338 2 2 0.0000646141
Actinidia chinensis Lachesis_group14 6 CH_ach_353 2 2 0.000162964
Brassica carinata ChrC09 6 CH_bca_1134 2 2 0.0000213764
Chara braunii BFEA01000069 6 CH_cbr_67 3 4 0.0000000310409
Hydrangea macrophylla Hma1.2p1_0049F.1 6 CH_hma_388 2 2 0.000111086
Salix brachista GWHAAZH00000018 6 CH_sbr_463 2 2 0.000063014
Sequoiadendron giganteum chr7 6 CH_sgi_792 3 3 0.00000000355983
Selaginella moellendorffii scaffold_31 6 CH_smo_115 3 6 0.00000104596
Utricularia gibba unitig_578 6 CH_ugi_153 2 2 0.0000820479
Vigna mungo CM024073.1 6 CH_vmu_338 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001