Functional clusters
Information
- Type InterPro
- Description Translation initiation factor 2, alpha subunit
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica oleracea | C4 | 5 | CH_bol_473 | 3 | 16 | 0.0000179368 |
| Magnolia biondii | Chr01 | 5 | CH_mbi_1087 | 2 | 3 | 0.000437077 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_452 | 2 | 2 | 0.0000521635 |
| Quercus lobata | 9 | 5 | CH_qlo_1402 | 2 | 3 | 0.000154883 |
| Solanum lycopersicum | SL4.0ch03 | 5 | CH_sly_867 | 2 | 5 | 0.000586889 |
| Tarenaya hassleriana | NW_010966881.1 | 5 | CH_tha_252 | 2 | 2 | 0.000209541 |
| Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_79 | 5 | 10 | 0.0000000000029583 |
| Brassica oleracea | C4 | 6 | CH_bol_473 | 3 | 16 | 0.0000179368 |
| Magnolia biondii | Chr01 | 6 | CH_mbi_1087 | 2 | 3 | 0.000437077 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_452 | 2 | 2 | 0.0000521635 |
| Quercus lobata | 9 | 6 | CH_qlo_1402 | 2 | 3 | 0.000154883 |
| Solanum lycopersicum | SL4.0ch03 | 6 | CH_sly_867 | 2 | 5 | 0.000586889 |
| Tarenaya hassleriana | NW_010966881.1 | 6 | CH_tha_252 | 2 | 2 | 0.000209541 |
| Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_79 | 5 | 10 | 0.0000000000029583 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |