Functional clusters
Information
- Type InterPro
- Description CRAL/TRIO, N-terminal domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr6 | 5 | CH_acertr_465 | 3 | 3 | 0.0000150889 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 5 | CH_bvu_271 | 3 | 3 | 0.00000699185 |
| Cannabis sativa | NC_044373.1 | 5 | CH_cansat_373 | 3 | 4 | 0.0000523353 |
| Corylus avellana | 1 | 5 | CH_cav_760 | 3 | 8 | 0.000561437 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_432 | 3 | 3 | 0.0000088345 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 5 | CH_eca_433 | 3 | 3 | 0.0000088345 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_444 | 3 | 3 | 0.0000260548 |
| Malus domestica | Chr10 | 5 | CH_mdo_769 | 3 | 3 | 0.0000197134 |
| Malus domestica | Chr05 | 5 | CH_mdo_892 | 3 | 4 | 0.0000788117 |
| Prunus persica | Pp08 | 5 | CH_ppe_286 | 4 | 4 | 0.0000000110283 |
| Papaver somniferum | NW_020645971.1 | 5 | CH_pso_1269 | 3 | 8 | 0.000833972 |
| Papaver somniferum | NW_020631041.1 | 5 | CH_pso_239 | 5 | 6 | 0.0000000000245545 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_1421 | 3 | 11 | 0.000694838 |
| Trochodendron aralioides | group11 | 5 | CH_tar_363 | 4 | 9 | 0.00000193683 |
| Acer truncatum | chr6 | 6 | CH_acertr_465 | 3 | 3 | 0.0000150889 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 6 | CH_bvu_271 | 3 | 3 | 0.00000699185 |
| Cannabis sativa | NC_044373.1 | 6 | CH_cansat_373 | 3 | 4 | 0.0000523353 |
| Corylus avellana | 1 | 6 | CH_cav_760 | 3 | 8 | 0.000561437 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_432 | 3 | 3 | 0.0000088345 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 6 | CH_eca_433 | 3 | 3 | 0.0000088345 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_444 | 3 | 3 | 0.0000260548 |
| Fragaria x ananassa | Fvb2-3 | 6 | CH_fan_1031 | 3 | 5 | 0.000405698 |
| Malus domestica | Chr10 | 6 | CH_mdo_769 | 3 | 3 | 0.0000197134 |
| Malus domestica | Chr05 | 6 | CH_mdo_892 | 3 | 4 | 0.0000788117 |
| Prunus persica | Pp08 | 6 | CH_ppe_286 | 4 | 4 | 0.0000000110283 |
| Papaver somniferum | NW_020645971.1 | 6 | CH_pso_1269 | 3 | 8 | 0.000833972 |
| Papaver somniferum | NW_020631041.1 | 6 | CH_pso_239 | 5 | 6 | 0.0000000000245545 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_1421 | 3 | 11 | 0.000694838 |
| Trochodendron aralioides | group11 | 6 | CH_tar_363 | 4 | 9 | 0.00000193683 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |