Functional clusters

Information

  • Type InterPro
  • Description GroES-like superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_316 6 7 0.0000000000864348
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_317 6 7 0.0000000000864348
Amborella trichopoda AmTr_v1.0_scaffold00023 5 CH_atr_346 4 10 0.0000443599
Amborella trichopoda AmTr_v1.0_scaffold00120 5 CH_atr_449 4 11 0.000208026
Camellia sinensis var. sinensis Chr9 5 CH_camsi_188 7 9 0.00000000000083544
Camellia sinensis var. sinensis Chr11 5 CH_camsi_583 5 9 0.000000507284
Citrus clementina scaffold_5 5 CH_ccl_375 5 15 0.00000122886
Eucalyptus grandis Chr08 5 CH_egr_656 7 19 0.0000000261301
Fragaria vesca Fvb2 5 CH_fve_94 8 15 0.0000000000000743475
Glycine max Gm14 5 CH_gma_479 4 6 0.0000074833
Gossypium raimondii Chr08 5 CH_gra_551 3 3 0.00031537
Helianthus annuus HanXRQChr02 5 CH_han_1095 3 3 0.000432131
Magnolia biondii Chr10 5 CH_mbi_591 4 6 0.00000370631
Magnolia biondii Chr04 5 CH_mbi_791 4 10 0.0000516338
Malus domestica Chr10 5 CH_mdo_216 8 23 0.0000000000502976
Malus domestica Chr05 5 CH_mdo_50 11 19 1.20726e-19
Medicago truncatula chr5 5 CH_mtr_44 13 17 6.15965e-29
Medicago truncatula chr3 5 CH_mtr_801 4 6 0.00000630282
Medicago truncatula chr4 5 CH_mtr_842 6 48 0.0000133268
Petunia axillaris Peaxi162Scf00174 5 CH_pax_506 3 3 0.000154628
Prasinoderma coloniale Chr10 5 CH_pco_2 4 15 0.000119803
Quercus lobata CM012294 5 CH_qlo_1039 4 4 0.00000454565
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_345 7 15 0.000000000119124
Simmondsia chinensis GWHAASQ00000026 5 CH_sci_344 3 3 0.000200349
Sequoiadendron giganteum chr1 5 CH_sgi_164 11 15 1.65629e-22
Solanum lycopersicum SL4.0ch09 5 CH_sly_396 4 5 0.0000013787
Solanum pennellii Spenn-ch09 5 CH_spe_293 4 4 0.00000015726
Solanum tuberosum ST4.03ch12 5 CH_stu_353 5 11 0.000000141142
Theobroma cacao Chromosome_1 5 CH_tca_47 9 10 1.73344e-19
Theobroma cacao Chromosome_5 5 CH_tca_646 3 3 0.000275339
Trifolium pratense Tp57577_TGAC_v2_scaf_431 5 CH_tpr_566 3 3 0.000213202
Trifolium pratense Tp57577_TGAC_v2_scaf_143 5 CH_tpr_795 3 4 0.00085154
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_145 5 5 0.0000000118087
Vitis vinifera chrUn 5 CH_vvi_138 11 64 0.00000000000674163
Vitis vinifera chr9 5 CH_vvi_229 7 21 0.0000000127465
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_316 6 7 0.0000000000864348
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_317 6 7 0.0000000000864348
Amborella trichopoda AmTr_v1.0_scaffold00023 6 CH_atr_346 4 10 0.0000443599
Amborella trichopoda AmTr_v1.0_scaffold00120 6 CH_atr_449 4 11 0.000208026
Camellia sinensis var. sinensis Chr9 6 CH_camsi_188 7 9 0.00000000000083544
Camellia sinensis var. sinensis Chr11 6 CH_camsi_583 5 9 0.000000507284
Citrus clementina scaffold_5 6 CH_ccl_375 5 15 0.00000122886
Eucalyptus grandis Chr08 6 CH_egr_656 7 19 0.0000000261301
Fragaria x ananassa Fvb1-1 6 CH_fan_64 9 20 0.00000000000000116884
Fragaria vesca Fvb2 6 CH_fve_94 8 15 0.0000000000000743475
Glycine max Gm14 6 CH_gma_479 4 6 0.0000074833
Gossypium raimondii Chr08 6 CH_gra_551 3 3 0.00031537
Helianthus annuus HanXRQChr02 6 CH_han_1095 3 3 0.000432131
Magnolia biondii Chr10 6 CH_mbi_591 4 6 0.00000370631
Magnolia biondii Chr04 6 CH_mbi_791 4 10 0.0000516338
Malus domestica Chr10 6 CH_mdo_216 8 23 0.0000000000502976
Malus domestica Chr05 6 CH_mdo_50 11 19 1.20726e-19
Medicago truncatula chr5 6 CH_mtr_44 13 17 6.15965e-29
Medicago truncatula chr3 6 CH_mtr_801 4 6 0.00000630282
Medicago truncatula chr4 6 CH_mtr_842 6 48 0.0000133268
Petunia axillaris Peaxi162Scf00174 6 CH_pax_506 3 3 0.000154628
Prasinoderma coloniale Chr10 6 CH_pco_2 4 15 0.000119803
Quercus lobata CM012294 6 CH_qlo_1039 4 4 0.00000454565
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_345 7 15 0.000000000119124
Simmondsia chinensis GWHAASQ00000026 6 CH_sci_344 3 3 0.000200349
Sequoiadendron giganteum chr1 6 CH_sgi_164 11 15 1.65629e-22
Solanum lycopersicum SL4.0ch09 6 CH_sly_396 4 5 0.0000013787
Solanum pennellii Spenn-ch09 6 CH_spe_293 4 4 0.00000015726
Solanum tuberosum ST4.03ch12 6 CH_stu_353 5 11 0.000000141142
Theobroma cacao Chromosome_1 6 CH_tca_47 9 10 1.73344e-19
Theobroma cacao Chromosome_5 6 CH_tca_646 3 3 0.000275339
Trifolium pratense Tp57577_TGAC_v2_scaf_431 6 CH_tpr_566 3 3 0.000213202
Trifolium pratense Tp57577_TGAC_v2_scaf_143 6 CH_tpr_795 3 4 0.00085154
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_145 5 5 0.0000000118087
Vitis vinifera chrUn 6 CH_vvi_138 11 64 0.00000000000674163
Vitis vinifera chr9 6 CH_vvi_229 7 21 0.0000000127465

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001