Functional clusters
Information
- Type InterPro
- Description Zinc finger, RING-CH-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 5 | CH_bvu_92 | 5 | 5 | 0.0000000000709782 |
| Carpinus fangiana | Cfa03 | 5 | CH_cfa_382 | 3 | 4 | 0.0000457478 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_506 | 3 | 6 | 0.000937119 |
| Daucus carota | DCARv2_Chr3 | 5 | CH_dca_100 | 5 | 5 | 0.000000000081667 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_108 | 7 | 8 | 0.000000000000036221 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_625 | 3 | 3 | 0.00027216 |
| Erythranthe guttata | scaffold_8 | 5 | CH_egut_93 | 8 | 11 | 0.00000000000000143688 |
| Magnolia biondii | Chr18 | 5 | CH_mbi_718 | 3 | 3 | 0.0000468584 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_1063 | 3 | 5 | 0.000273742 |
| Rhododendron simsii | chr04 | 5 | CH_rsi_842 | 5 | 49 | 0.000288628 |
| Selaginella moellendorffii | scaffold_3 | 5 | CH_smo_149 | 4 | 12 | 0.00000582738 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 6 | CH_bvu_92 | 5 | 5 | 0.0000000000709782 |
| Carpinus fangiana | Cfa03 | 6 | CH_cfa_382 | 3 | 4 | 0.0000457478 |
| Cucumis melo | chr01 | 6 | CH_cme_266 | 3 | 3 | 0.0000243933 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_506 | 3 | 6 | 0.000937119 |
| Daucus carota | DCARv2_Chr3 | 6 | CH_dca_100 | 5 | 5 | 0.000000000081667 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_108 | 7 | 8 | 0.000000000000036221 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_625 | 3 | 3 | 0.00027216 |
| Erythranthe guttata | scaffold_8 | 6 | CH_egut_93 | 8 | 11 | 0.00000000000000143688 |
| Magnolia biondii | Chr18 | 6 | CH_mbi_718 | 3 | 3 | 0.0000468584 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_1063 | 3 | 5 | 0.000273742 |
| Rhododendron simsii | chr04 | 6 | CH_rsi_842 | 5 | 49 | 0.000288628 |
| Selaginella moellendorffii | scaffold_3 | 6 | CH_smo_149 | 4 | 12 | 0.00000582738 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |