Functional clusters
Information
- Type InterPro
- Description Zinc finger, FYVE/PHD-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica oleracea | C1 | 5 | CH_bol_879 | 3 | 3 | 0.000883515 |
| Cannabis sativa | NC_044372.1 | 5 | CH_cansat_279 | 5 | 11 | 0.00000208546 |
| Gossypium hirsutum | A07 | 5 | CH_ghi_731 | 4 | 4 | 0.0000174192 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_1246 | 5 | 31 | 0.000773932 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_723 | 4 | 5 | 0.0000108546 |
| Quercus lobata | 12 | 5 | CH_qlo_980 | 7 | 40 | 0.00000151963 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_257 | 6 | 11 | 0.0000000161822 |
| Brassica oleracea | C1 | 6 | CH_bol_879 | 3 | 3 | 0.000883515 |
| Cannabis sativa | NC_044372.1 | 6 | CH_cansat_279 | 5 | 11 | 0.00000208546 |
| Gossypium hirsutum | A07 | 6 | CH_ghi_731 | 4 | 4 | 0.0000174192 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_1246 | 5 | 31 | 0.000773932 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_723 | 4 | 5 | 0.0000108546 |
| Quercus lobata | 12 | 6 | CH_qlo_980 | 7 | 40 | 0.00000151963 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_257 | 6 | 11 | 0.0000000161822 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |