Functional clusters

Information

  • Type InterPro
  • Description Protein kinase-like domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 5 CH_aar_88 11 12 0.000000000148746
Actinidia chinensis Lachesis_group21 5 CH_ach_418 15 65 0.000250661
Arabidopsis lyrata scaffold_5 5 CH_aly_90 11 11 0.0000000000067413
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_609 10 14 0.000000812982
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 5 CH_arhy_868 9 14 0.0000381041
Amborella trichopoda AmTr_v1.0_scaffold00056 5 CH_atr_145 11 18 0.00000000522966
Amborella trichopoda AmTr_v1.0_scaffold00022 5 CH_atr_533 10 33 0.000366593
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_88 14 22 0.0000000000308744
Camellia sinensis var. sinensis Chr7 5 CH_camsi_153 20 35 0.000000000000086417
Camellia sinensis var. sinensis Chr10 5 CH_camsi_206 19 36 0.00000000000468546
Camellia sinensis var. sinensis Chr1 5 CH_camsi_411 12 17 0.0000000155199
Camellia sinensis var. sinensis Chr7 5 CH_camsi_627 14 31 0.000000802869
Cannabis sativa NC_044373.1 5 CH_cansat_482 12 44 0.000240842
Capsicum annuum PGAv.1.6.scaffold404 5 CH_can_163 20 44 0.000000000050004
Capsicum annuum PGAv.1.6.scaffold783 5 CH_can_360 13 26 0.000000932292
Capsicum annuum PGAv.1.6.scaffold1212 5 CH_can_415 11 19 0.00000377627
Capsicum annuum PGAv.1.6.scaffold801 5 CH_can_443 10 16 0.00000921459
Capsicum annuum PGAv.1.6.scaffold411 5 CH_can_604 19 79 0.000102615
Capsicum annuum PGAv.1.6.scaffold160 5 CH_can_627 10 20 0.000178196
Capsicum annuum PGAv.1.6.scaffold62 5 CH_can_753 7 9 0.00045869
Capsicum annuum PGAv.1.6.scaffold525 5 CH_can_83 20 27 5.50731e-17
Corylus avellana 1 5 CH_cav_308 9 11 0.00000186783
Chara braunii BFEA01000589 5 CH_cbr_159 6 9 0.0000625145
Citrus clementina scaffold_6 5 CH_ccl_231 10 10 0.00000000341129
Citrus clementina scaffold_3 5 CH_ccl_359 19 57 0.000000826328
Citrus clementina scaffold_3 5 CH_ccl_502 20 80 0.0000782473
Citrus clementina scaffold_5 5 CH_ccl_63 20 22 9.25065e-20
Ceratophyllum demersum 7 5 CH_cde_142 7 7 0.00000329414
Carpinus fangiana Cfa07 5 CH_cfa_242 19 77 0.000000204681
Carpinus fangiana scaffold16 5 CH_cfa_303 15 52 0.00000291551
Carpinus fangiana Cfa04 5 CH_cfa_530 7 11 0.000388123
Cardamine hirsuta Chr7 5 CH_chi_427 9 14 0.000023073
Cardamine hirsuta Chr8 5 CH_chi_809 8 14 0.000781787
Chenopodium quinoa C_Quinoa_Scaffold_3617 5 CH_cqu_257 19 54 0.000000010442
Chenopodium quinoa C_Quinoa_Scaffold_2081 5 CH_cqu_266 13 22 0.0000000161605
Chlamydomonas reinhardtii chromosome_11 5 CH_cre_96 6 6 0.0000685161
Capsella rubella scaffold_5 5 CH_cru_321 8 9 0.00000180338
Daucus carota DCARv2_Chr4 5 CH_dca_135 15 30 0.00000000275319
Daucus carota DCARv2_Chr7 5 CH_dca_459 11 27 0.0000914057
Davidia involucrata GWHABJS00000018 5 CH_din_265 11 20 0.000000219692
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_164 22 76 0.00000000136036
Eucalyptus grandis Chr11 5 CH_egr_660 14 20 0.0000000304835
Erythranthe guttata scaffold_14 5 CH_egut_322 10 14 0.000000535357
Eutrema salsugineum scaffold_19 5 CH_esa_108 10 10 0.00000000030876
Fragaria vesca Fvb3 5 CH_fve_138 21 58 0.000000000017254
Fragaria vesca Fvb7 5 CH_fve_572 13 43 0.0000864514
Helianthus annuus HanXRQChr04 5 CH_han_124 19 26 0.00000000000000727319
Helianthus annuus HanXRQChr13 5 CH_han_344 25 80 0.00000000634881
Helianthus annuus HanXRQChr03 5 CH_han_521 15 32 0.000000564655
Helianthus annuus HanXRQChr11 5 CH_han_656 10 14 0.00000541685
Helianthus annuus HanXRQChr03 5 CH_han_732 11 19 0.0000172598
Hydrangea macrophylla Hma1.2p1_0085F.1 5 CH_hma_184 7 8 0.00000130935
Lonicera japonica GWHAAZE00000007 5 CH_lonja_1110 7 9 0.000484636
Lonicera japonica GWHAAZE00000006 5 CH_lonja_170 24 51 0.0000000000000165445
Lonicera japonica GWHAAZE00000003 5 CH_lonja_47 30 35 5.42478e-31
Lonicera japonica GWHAAZE00000003 5 CH_lonja_645 12 26 0.0000156426
Lonicera japonica GWHAAZE00000007 5 CH_lonja_685 16 53 0.0000379683
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_141 13 14 0.00000000000223872
Lactuca sativa Lsat_1_v8_lg_1 5 CH_lsa_191 23 63 0.000000000107642
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_246 17 37 0.00000000275623
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_744 17 67 0.000275295
Magnolia biondii Chr18 5 CH_mbi_191 22 78 0.0000000000372197
Magnolia biondii Chr14 5 CH_mbi_518 17 70 0.000000969296
Magnolia biondii Chr15 5 CH_mbi_550 15 54 0.00000178723
Malus domestica Chr02 5 CH_mdo_124 27 78 0.0000000000000807487
Manihot esculenta Chromosome10 5 CH_mes_116 28 70 0.0000000000000406804
Medicago truncatula chr5 5 CH_mtr_1209 8 14 0.000274799
Medicago truncatula chr7 5 CH_mtr_1320 6 7 0.000613659
Medicago truncatula chr5 5 CH_mtr_487 20 73 0.0000000256361
Nelumbo nucifera chr8 5 CH_nnu_134 20 74 0.00000000494182
Nelumbo nucifera chr5 5 CH_nnu_17 30 55 5.66841e-26
Nelumbo nucifera chr5 5 CH_nnu_207 11 20 0.000000179555
Petunia axillaris Peaxi162Scf00079 5 CH_pax_592 6 7 0.00035615
Punica granatum NC_045127.1 5 CH_pgr_282 18 68 0.00000139127
Prunus persica Pp02 5 CH_ppe_226 14 21 0.000000000327524
Papaver somniferum NC_039366.1 5 CH_pso_1236 7 14 0.000682462
Quercus lobata 12 5 CH_qlo_1033 8 8 0.00000408122
Quercus lobata 5 5 CH_qlo_135 30 46 5.25393e-22
Quercus lobata 4 5 CH_qlo_1387 11 21 0.000152499
Quercus lobata 10 5 CH_qlo_314 22 36 0.0000000000000231887
Quercus lobata 5 5 CH_qlo_594 19 39 0.00000000171495
Quercus lobata 11 5 CH_qlo_756 23 68 0.0000000496566
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1171 15 54 0.000140515
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_317 20 47 0.0000000000275933
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_452 19 54 0.00000000935661
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_486 15 32 0.000000021548
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_663 13 27 0.000000520196
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_676 11 18 0.000000652591
Rhododendron simsii chr06 5 CH_rsi_158 25 61 0.0000000000000673206
Rhododendron simsii chr09 5 CH_rsi_448 8 8 0.000000448128
Rhododendron simsii chr06 5 CH_rsi_498 11 19 0.00000207528
Salvia bowleyana GWHASIU00000001 5 CH_sbo_219 10 13 0.00000000120986
Salvia bowleyana GWHASIU00000008 5 CH_sbo_683 13 66 0.000420556
Salix brachista GWHAAZH00000017 5 CH_sbr_450 9 15 0.0000615989
Simmondsia chinensis GWHAASQ00000005 5 CH_sci_68 15 29 0.000000000201702
Sechium edule LG02 5 CH_sed_303 8 11 0.0000497611
Sequoiadendron giganteum chr7 5 CH_sgi_1022 19 58 0.0000000541358
Sequoiadendron giganteum chr1 5 CH_sgi_137 28 42 3.07044e-24
Sequoiadendron giganteum chr3 5 CH_sgi_1512 10 18 0.0000226677
Sequoiadendron giganteum chr5 5 CH_sgi_1534 9 14 0.0000278405
Sequoiadendron giganteum chr11 5 CH_sgi_2168 8 12 0.000170836
Sequoiadendron giganteum chr8 5 CH_sgi_535 19 38 0.00000000000452594
Solanum lycopersicum SL4.0ch07 5 CH_sly_452 12 30 0.00000517605
Solanum lycopersicum SL4.0ch02 5 CH_sly_85 24 56 4.48357e-16
Selaginella moellendorffii scaffold_40 5 CH_smo_257 11 31 0.00022012
Selaginella moellendorffii scaffold_89 5 CH_smo_303 8 15 0.000488356
Selaginella moellendorffii scaffold_6 5 CH_smo_336 14 58 0.000597099
Selaginella moellendorffii scaffold_2 5 CH_smo_44 13 19 0.000000000164786
Solanum pennellii Spenn-ch02 5 CH_spe_202 19 79 0.0000000045798
Solanum pennellii Spenn-ch03 5 CH_spe_743 14 75 0.000282454
Solanum tuberosum ST4.03ch02 5 CH_stu_210 13 21 0.000000000204302
Solanum tuberosum ST4.03ch04 5 CH_stu_312 11 18 0.0000000331196
Solanum tuberosum ST4.03ch05 5 CH_stu_35 25 37 1.49644e-24
Solanum tuberosum ST4.03ch01 5 CH_stu_546 10 23 0.0000316904
Solanum tuberosum ST4.03ch03 5 CH_stu_813 11 36 0.000368933
Selenicereus undatus Scaffold_33680 5 CH_sun_6 30 68 3.73609e-25
Trochodendron aralioides group4 5 CH_tar_416 7 7 0.00000903881
Theobroma cacao Chromosome_10 5 CH_tca_59 24 42 6.41882e-18
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_373 10 17 0.0000247773
Vigna mungo CM024073.1 5 CH_vmu_301 11 25 0.0000533429
Vigna mungo CM024070.1 5 CH_vmu_479 10 22 0.000201946
Vitis vinifera chrUn 5 CH_vvi_564 10 22 0.00019767
Vitis vinifera chr11 5 CH_vvi_731 8 14 0.00065443
Aethionema arabicum LG-4 6 CH_aar_88 11 12 0.000000000148746
Actinidia chinensis Lachesis_group21 6 CH_ach_418 15 65 0.000250661
Arabidopsis lyrata scaffold_5 6 CH_aly_90 11 11 0.0000000000067413
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_609 10 14 0.000000812982
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 6 CH_arhy_868 9 14 0.0000381041
Amborella trichopoda AmTr_v1.0_scaffold00056 6 CH_atr_145 11 18 0.00000000522966
Amborella trichopoda AmTr_v1.0_scaffold00022 6 CH_atr_533 10 33 0.000366593
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_88 14 22 0.0000000000308744
Camellia sinensis var. sinensis Chr7 6 CH_camsi_153 20 35 0.000000000000086417
Camellia sinensis var. sinensis Chr10 6 CH_camsi_206 19 36 0.00000000000468546
Camellia sinensis var. sinensis Chr1 6 CH_camsi_411 12 17 0.0000000155199
Camellia sinensis var. sinensis Chr7 6 CH_camsi_627 14 31 0.000000802869
Cannabis sativa NC_044373.1 6 CH_cansat_482 12 44 0.000240842
Capsicum annuum PGAv.1.6.scaffold404 6 CH_can_163 20 44 0.000000000050004
Capsicum annuum PGAv.1.6.scaffold783 6 CH_can_360 13 26 0.000000932292
Capsicum annuum PGAv.1.6.scaffold1212 6 CH_can_415 11 19 0.00000377627
Capsicum annuum PGAv.1.6.scaffold801 6 CH_can_443 10 16 0.00000921459
Capsicum annuum PGAv.1.6.scaffold411 6 CH_can_604 19 79 0.000102615
Capsicum annuum PGAv.1.6.scaffold160 6 CH_can_627 10 20 0.000178196
Capsicum annuum PGAv.1.6.scaffold62 6 CH_can_753 7 9 0.00045869
Capsicum annuum PGAv.1.6.scaffold525 6 CH_can_83 20 27 5.50731e-17
Corylus avellana 1 6 CH_cav_308 9 11 0.00000186783
Chara braunii BFEA01000589 6 CH_cbr_159 6 9 0.0000625145
Citrus clementina scaffold_6 6 CH_ccl_231 10 10 0.00000000341129
Citrus clementina scaffold_3 6 CH_ccl_359 19 57 0.000000826328
Citrus clementina scaffold_3 6 CH_ccl_502 20 80 0.0000782473
Citrus clementina scaffold_5 6 CH_ccl_63 20 22 9.25065e-20
Ceratophyllum demersum 7 6 CH_cde_142 7 7 0.00000329414
Carpinus fangiana Cfa07 6 CH_cfa_242 19 77 0.000000204681
Carpinus fangiana scaffold16 6 CH_cfa_303 15 52 0.00000291551
Carpinus fangiana Cfa04 6 CH_cfa_530 7 11 0.000388123
Cardamine hirsuta Chr7 6 CH_chi_427 9 14 0.000023073
Cardamine hirsuta Chr8 6 CH_chi_809 8 14 0.000781787
Chenopodium quinoa C_Quinoa_Scaffold_3617 6 CH_cqu_257 19 54 0.000000010442
Chenopodium quinoa C_Quinoa_Scaffold_2081 6 CH_cqu_266 13 22 0.0000000161605
Chlamydomonas reinhardtii chromosome_11 6 CH_cre_96 6 6 0.0000685161
Capsella rubella scaffold_5 6 CH_cru_321 8 9 0.00000180338
Daucus carota DCARv2_Chr4 6 CH_dca_135 15 30 0.00000000275319
Daucus carota DCARv2_Chr7 6 CH_dca_459 11 27 0.0000914057
Davidia involucrata GWHABJS00000018 6 CH_din_265 11 20 0.000000219692
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_164 22 76 0.00000000136036
Eucalyptus grandis Chr11 6 CH_egr_660 14 20 0.0000000304835
Erythranthe guttata scaffold_14 6 CH_egut_322 10 14 0.000000535357
Eutrema salsugineum scaffold_19 6 CH_esa_108 10 10 0.00000000030876
Fragaria vesca Fvb3 6 CH_fve_138 21 58 0.000000000017254
Fragaria vesca Fvb7 6 CH_fve_572 13 43 0.0000864514
Helianthus annuus HanXRQChr04 6 CH_han_124 19 26 0.00000000000000727319
Helianthus annuus HanXRQChr13 6 CH_han_344 25 80 0.00000000634881
Helianthus annuus HanXRQChr03 6 CH_han_521 15 32 0.000000564655
Helianthus annuus HanXRQChr11 6 CH_han_656 10 14 0.00000541685
Helianthus annuus HanXRQChr03 6 CH_han_732 11 19 0.0000172598
Hydrangea macrophylla Hma1.2p1_0085F.1 6 CH_hma_184 7 8 0.00000130935
Lonicera japonica GWHAAZE00000007 6 CH_lonja_1110 7 9 0.000484636
Lonicera japonica GWHAAZE00000006 6 CH_lonja_170 24 51 0.0000000000000165445
Lonicera japonica GWHAAZE00000003 6 CH_lonja_47 30 35 5.42478e-31
Lonicera japonica GWHAAZE00000003 6 CH_lonja_645 12 26 0.0000156426
Lonicera japonica GWHAAZE00000007 6 CH_lonja_685 16 53 0.0000379683
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_141 13 14 0.00000000000223872
Lactuca sativa Lsat_1_v8_lg_1 6 CH_lsa_191 23 63 0.000000000107642
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_246 17 37 0.00000000275623
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_744 17 67 0.000275295
Magnolia biondii Chr18 6 CH_mbi_191 22 78 0.0000000000372197
Magnolia biondii Chr14 6 CH_mbi_518 17 70 0.000000969296
Magnolia biondii Chr15 6 CH_mbi_550 15 54 0.00000178723
Malus domestica Chr02 6 CH_mdo_124 27 78 0.0000000000000807487
Manihot esculenta Chromosome10 6 CH_mes_116 28 70 0.0000000000000406804
Medicago truncatula chr5 6 CH_mtr_1209 8 14 0.000274799
Medicago truncatula chr7 6 CH_mtr_1320 6 7 0.000613659
Medicago truncatula chr5 6 CH_mtr_487 20 73 0.0000000256361
Nelumbo nucifera chr8 6 CH_nnu_134 20 74 0.00000000494182
Nelumbo nucifera chr5 6 CH_nnu_17 30 55 5.66841e-26
Nelumbo nucifera chr5 6 CH_nnu_207 11 20 0.000000179555
Petunia axillaris Peaxi162Scf00079 6 CH_pax_592 6 7 0.00035615
Punica granatum NC_045127.1 6 CH_pgr_282 18 68 0.00000139127
Prunus persica Pp02 6 CH_ppe_226 14 21 0.000000000327524
Papaver somniferum NC_039366.1 6 CH_pso_1236 7 14 0.000682462
Quercus lobata 12 6 CH_qlo_1033 8 8 0.00000408122
Quercus lobata 5 6 CH_qlo_135 30 46 5.25393e-22
Quercus lobata 4 6 CH_qlo_1387 11 21 0.000152499
Quercus lobata 10 6 CH_qlo_314 22 36 0.0000000000000231887
Quercus lobata 5 6 CH_qlo_594 19 39 0.00000000171495
Quercus lobata 11 6 CH_qlo_756 23 68 0.0000000496566
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1171 15 54 0.000140515
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_317 20 47 0.0000000000275933
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_452 19 54 0.00000000935661
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_486 15 32 0.000000021548
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_663 13 27 0.000000520196
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_676 11 18 0.000000652591
Rhododendron simsii chr06 6 CH_rsi_158 25 61 0.0000000000000673206
Rhododendron simsii chr09 6 CH_rsi_448 8 8 0.000000448128
Rhododendron simsii chr06 6 CH_rsi_498 11 19 0.00000207528
Salvia bowleyana GWHASIU00000001 6 CH_sbo_219 10 13 0.00000000120986
Salvia bowleyana GWHASIU00000008 6 CH_sbo_683 13 66 0.000420556
Salix brachista GWHAAZH00000017 6 CH_sbr_450 9 15 0.0000615989
Simmondsia chinensis GWHAASQ00000005 6 CH_sci_68 15 29 0.000000000201702
Sechium edule LG02 6 CH_sed_303 8 11 0.0000497611
Sequoiadendron giganteum chr7 6 CH_sgi_1022 19 58 0.0000000541358
Sequoiadendron giganteum chr1 6 CH_sgi_137 28 42 3.07044e-24
Sequoiadendron giganteum chr3 6 CH_sgi_1512 10 18 0.0000226677
Sequoiadendron giganteum chr5 6 CH_sgi_1534 9 14 0.0000278405
Sequoiadendron giganteum chr11 6 CH_sgi_2168 8 12 0.000170836
Sequoiadendron giganteum chr8 6 CH_sgi_535 19 38 0.00000000000452594
Solanum lycopersicum SL4.0ch07 6 CH_sly_452 12 30 0.00000517605
Solanum lycopersicum SL4.0ch02 6 CH_sly_85 24 56 4.48357e-16
Selaginella moellendorffii scaffold_40 6 CH_smo_257 11 31 0.00022012
Selaginella moellendorffii scaffold_89 6 CH_smo_303 8 15 0.000488356
Selaginella moellendorffii scaffold_6 6 CH_smo_336 14 58 0.000597099
Selaginella moellendorffii scaffold_2 6 CH_smo_44 13 19 0.000000000164786
Solanum pennellii Spenn-ch02 6 CH_spe_202 19 79 0.0000000045798
Solanum pennellii Spenn-ch03 6 CH_spe_743 14 75 0.000282454
Solanum tuberosum ST4.03ch02 6 CH_stu_210 13 21 0.000000000204302
Solanum tuberosum ST4.03ch04 6 CH_stu_312 11 18 0.0000000331196
Solanum tuberosum ST4.03ch05 6 CH_stu_35 25 37 1.49644e-24
Solanum tuberosum ST4.03ch01 6 CH_stu_546 10 23 0.0000316904
Solanum tuberosum ST4.03ch03 6 CH_stu_813 11 36 0.000368933
Selenicereus undatus Scaffold_33680 6 CH_sun_6 30 68 3.73609e-25
Trochodendron aralioides group4 6 CH_tar_416 7 7 0.00000903881
Theobroma cacao Chromosome_10 6 CH_tca_59 24 42 6.41882e-18
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_373 10 17 0.0000247773
Vigna mungo CM024073.1 6 CH_vmu_301 11 25 0.0000533429
Vigna mungo CM024070.1 6 CH_vmu_479 10 22 0.000201946
Vitis vinifera chrUn 6 CH_vvi_564 10 22 0.00019767
Vitis vinifera chr11 6 CH_vvi_731 8 14 0.00065443

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001