Functional clusters
Information
- Type InterPro
- Description CheY-like superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Chara braunii | BFEA01000143 | 5 | CH_cbr_51 | 6 | 29 | 0.00000000205118 |
| Citrus clementina | scaffold_7 | 5 | CH_ccl_441 | 4 | 8 | 0.0000129097 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_579 | 3 | 3 | 0.00011588 |
| Carpinus fangiana | Cfa07 | 5 | CH_cfa_433 | 3 | 3 | 0.0000917179 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2185 | 5 | CH_cqu_797 | 3 | 3 | 0.000227403 |
| Daucus carota | DCARv2_Chr4 | 5 | CH_dca_720 | 4 | 14 | 0.000787496 |
| Davidia involucrata | GWHABJS00000006 | 5 | CH_din_778 | 3 | 4 | 0.000595292 |
| Gossypium hirsutum | A07 | 5 | CH_ghi_1188 | 3 | 3 | 0.000499637 |
| Gossypium raimondii | Chr01 | 5 | CH_gra_545 | 3 | 3 | 0.000235999 |
| Magnolia biondii | Chr03 | 5 | CH_mbi_792 | 3 | 3 | 0.0000537081 |
| Prunus persica | Pp05 | 5 | CH_ppe_560 | 3 | 3 | 0.0000546325 |
| Populus trichocarpa | Chr01 | 5 | CH_ptr_424 | 7 | 67 | 0.00000307754 |
| Quercus lobata | 5 | 5 | CH_qlo_1621 | 4 | 17 | 0.000330476 |
| Quercus lobata | 9 | 5 | CH_qlo_561 | 6 | 14 | 0.000000000712358 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_1161 | 3 | 4 | 0.00012621 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_937 | 3 | 3 | 0.0000315724 |
| Striga asiatica | scaffold17 | 5 | CH_sas_223 | 3 | 4 | 0.000581339 |
| Simmondsia chinensis | GWHAASQ00000017 | 5 | CH_sci_22 | 9 | 9 | 9.81973e-21 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_641 | 3 | 3 | 0.0000772086 |
| Chara braunii | BFEA01000143 | 6 | CH_cbr_51 | 6 | 29 | 0.00000000205118 |
| Citrus clementina | scaffold_7 | 6 | CH_ccl_441 | 4 | 8 | 0.0000129097 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_579 | 3 | 3 | 0.00011588 |
| Carpinus fangiana | Cfa07 | 6 | CH_cfa_433 | 3 | 3 | 0.0000917179 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2185 | 6 | CH_cqu_797 | 3 | 3 | 0.000227403 |
| Daucus carota | DCARv2_Chr4 | 6 | CH_dca_720 | 4 | 14 | 0.000787496 |
| Davidia involucrata | GWHABJS00000006 | 6 | CH_din_778 | 3 | 4 | 0.000595292 |
| Fragaria x ananassa | Fvb2-3 | 6 | CH_fan_483 | 5 | 15 | 0.00000188321 |
| Gossypium hirsutum | A07 | 6 | CH_ghi_1188 | 3 | 3 | 0.000499637 |
| Gossypium raimondii | Chr01 | 6 | CH_gra_545 | 3 | 3 | 0.000235999 |
| Magnolia biondii | Chr03 | 6 | CH_mbi_792 | 3 | 3 | 0.0000537081 |
| Prunus persica | Pp05 | 6 | CH_ppe_560 | 3 | 3 | 0.0000546325 |
| Populus trichocarpa | Chr01 | 6 | CH_ptr_424 | 7 | 67 | 0.00000307754 |
| Quercus lobata | 5 | 6 | CH_qlo_1621 | 4 | 17 | 0.000330476 |
| Quercus lobata | 9 | 6 | CH_qlo_561 | 6 | 14 | 0.000000000712358 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_1161 | 3 | 4 | 0.00012621 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_937 | 3 | 3 | 0.0000315724 |
| Striga asiatica | scaffold17 | 6 | CH_sas_223 | 3 | 4 | 0.000581339 |
| Simmondsia chinensis | GWHAASQ00000017 | 6 | CH_sci_22 | 9 | 9 | 9.81973e-21 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_641 | 3 | 3 | 0.0000772086 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |