Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF1517
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_530 | 2 | 3 | 0.000721742 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 5 | CH_arhy_1103 | 2 | 2 | 0.000299383 |
| Corchorus olitorius | AWUE01015649.1 | 5 | CH_col_46 | 5 | 20 | 0.000000000845379 |
| Chlamydomonas reinhardtii | chromosome_11 | 5 | CH_cre_187 | 2 | 2 | 0.0006824 |
| Capsella rubella | scaffold_2 | 5 | CH_cru_118 | 4 | 7 | 0.0000000000410409 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 5 | CH_eca_93 | 4 | 7 | 0.00000000000948685 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_90 | 5 | 6 | 0.00000000000000126522 |
| Eutrema salsugineum | scaffold_8 | 5 | CH_esa_340 | 2 | 2 | 0.0000761499 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_110 | 5 | 6 | 0.00000000000108494 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_122 | 5 | 8 | 0.0000000000000056193 |
| Lupinus albus | Lalb_Chr15 | 5 | CH_lal_611 | 2 | 2 | 0.000314895 |
| Lotus japonicus | chr6 | 5 | CH_lja_150 | 3 | 3 | 0.0000000306812 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_61 | 6 | 8 | 2.26086e-19 |
| Medicago truncatula | chr3 | 5 | CH_mtr_1283 | 2 | 2 | 0.000410863 |
| Papaver somniferum | NC_039359.1 | 5 | CH_pso_970 | 2 | 2 | 0.000135176 |
| Papaver somniferum | NC_039367.1 | 5 | CH_pso_971 | 2 | 2 | 0.000135176 |
| Quercus lobata | 6 | 5 | CH_qlo_431 | 4 | 4 | 0.00000000000619333 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_93 | 7 | 15 | 1.62726e-20 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_530 | 2 | 3 | 0.000721742 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 6 | CH_arhy_1103 | 2 | 2 | 0.000299383 |
| Corchorus olitorius | AWUE01015649.1 | 6 | CH_col_46 | 5 | 20 | 0.000000000845379 |
| Chlamydomonas reinhardtii | chromosome_11 | 6 | CH_cre_187 | 2 | 2 | 0.0006824 |
| Capsella rubella | scaffold_2 | 6 | CH_cru_118 | 4 | 7 | 0.0000000000410409 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 6 | CH_eca_93 | 4 | 7 | 0.00000000000948685 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_90 | 5 | 6 | 0.00000000000000126522 |
| Eutrema salsugineum | scaffold_8 | 6 | CH_esa_340 | 2 | 2 | 0.0000761499 |
| Fragaria x ananassa | Fvb6-3 | 6 | CH_fan_218 | 4 | 4 | 0.00000000173701 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_273 | 4 | 6 | 0.0000000260407 |
| Fragaria x ananassa | Fvb6-3 | 6 | CH_fan_686 | 3 | 4 | 0.0000202913 |
| Fragaria x ananassa | Fvb6-2 | 6 | CH_fan_77 | 7 | 21 | 0.00000000000000682658 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_110 | 5 | 6 | 0.00000000000108494 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_122 | 5 | 8 | 0.0000000000000056193 |
| Lupinus albus | Lalb_Chr15 | 6 | CH_lal_611 | 2 | 2 | 0.000314895 |
| Lotus japonicus | chr6 | 6 | CH_lja_150 | 3 | 3 | 0.0000000306812 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_61 | 6 | 8 | 2.26086e-19 |
| Medicago truncatula | chr3 | 6 | CH_mtr_1283 | 2 | 2 | 0.000410863 |
| Papaver somniferum | NC_039359.1 | 6 | CH_pso_970 | 2 | 2 | 0.000135176 |
| Papaver somniferum | NC_039367.1 | 6 | CH_pso_971 | 2 | 2 | 0.000135176 |
| Quercus lobata | 6 | 6 | CH_qlo_431 | 4 | 4 | 0.00000000000619333 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_93 | 7 | 15 | 1.62726e-20 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |