Functional clusters

Information

  • Type InterPro
  • Description VDE lipocalin domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cardamine hirsuta Chr4 5 CH_chi_612 2 2 0.000207361
Glycine max Gm08 5 CH_gma_809 2 2 0.000379557
Hydrangea macrophylla Hma1.2p1_0123F.1 5 CH_hma_568 2 2 0.000333259
Lonicera japonica GWHAAZE00000002 5 CH_lonja_640 3 17 0.0000146226
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_633 3 7 0.0000003337
Solanum tuberosum ST4.03ch04 5 CH_stu_542 3 12 0.000030304
Solanum tuberosum ST4.03ch04 5 CH_stu_743 3 22 0.000211911
Utricularia gibba unitig_46 5 CH_ugi_255 2 2 0.000246144
Cardamine hirsuta Chr4 6 CH_chi_612 2 2 0.000207361
Cucumis melo chr11 6 CH_cme_371 2 2 0.000200133
Glycine max Gm08 6 CH_gma_809 2 2 0.000379557
Hydrangea macrophylla Hma1.2p1_0123F.1 6 CH_hma_568 2 2 0.000333259
Lonicera japonica GWHAAZE00000002 6 CH_lonja_640 3 17 0.0000146226
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_633 3 7 0.0000003337
Solanum tuberosum ST4.03ch04 6 CH_stu_542 3 12 0.000030304
Solanum tuberosum ST4.03ch04 6 CH_stu_743 3 22 0.000211911
Utricularia gibba unitig_46 6 CH_ugi_255 2 2 0.000246144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001