Functional clusters
Information
- Type InterPro
- Description Pescadillo
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB01 | 5 | CH_bca_1133 | 2 | 2 | 0.0000213764 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1168 | 5 | CH_cqu_748 | 2 | 2 | 0.000142146 |
| Hydrangea macrophylla | Hma1.2p1_0078F.1 | 5 | CH_hma_147 | 3 | 3 | 0.000000185113 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_1007 | 3 | 48 | 0.000041195 |
| Simmondsia chinensis | GWHAASQ00000003 | 5 | CH_sci_289 | 2 | 2 | 0.0000851426 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_1698 | 2 | 2 | 0.0000487151 |
| Zea mays | 1 | 5 | CH_zma_334 | 2 | 2 | 0.0000511313 |
| Brassica carinata | ChrB01 | 6 | CH_bca_1133 | 2 | 2 | 0.0000213764 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1168 | 6 | CH_cqu_748 | 2 | 2 | 0.000142146 |
| Hydrangea macrophylla | Hma1.2p1_0078F.1 | 6 | CH_hma_147 | 3 | 3 | 0.000000185113 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_1007 | 3 | 48 | 0.000041195 |
| Simmondsia chinensis | GWHAASQ00000003 | 6 | CH_sci_289 | 2 | 2 | 0.0000851426 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_1698 | 2 | 2 | 0.0000487151 |
| Zea mays | 1 | 6 | CH_zma_334 | 2 | 2 | 0.0000511313 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |