Functional clusters

Information

  • Type InterPro
  • Description Plant specific eukaryotic initiation factor 4B

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_998 2 2 0.00070497
Acer truncatum chr10 5 CH_acertr_999 2 2 0.00070497
Aquilegia oxysepala CHR05 5 CH_aox_490 2 2 0.000481193
Amborella trichopoda AmTr_v1.0_scaffold00114 5 CH_atr_580 2 2 0.000476644
Brassica carinata ChrC03 5 CH_bca_1357 3 28 0.000078508
Brassica napus C02 5 CH_bna_1196 3 21 0.00024981
Camellia sinensis var. sinensis Chr10 5 CH_camsi_1543 2 2 0.000962949
Carya illinoinensis Chr10 5 CH_cil_863 2 2 0.000929742
Carica papaya supercontig_81 5 CH_cpa_663 2 2 0.000950661
Helianthus annuus HanXRQChr15 5 CH_han_989 2 2 0.000231857
Olea europaea chr1 5 CH_oeu_668 2 2 0.000800683
Petunia axillaris Peaxi162Scf00074 5 CH_pax_630 2 2 0.000422134
Physcomitrium patens Chr03 5 CH_ppa_372 2 2 0.000612726
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1238 2 2 0.000239192
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_799 2 2 0.000929238
Acer truncatum chr6 6 CH_acertr_998 2 2 0.00070497
Acer truncatum chr10 6 CH_acertr_999 2 2 0.00070497
Aquilegia oxysepala CHR05 6 CH_aox_490 2 2 0.000481193
Amborella trichopoda AmTr_v1.0_scaffold00114 6 CH_atr_580 2 2 0.000476644
Brassica carinata ChrC03 6 CH_bca_1357 3 28 0.000078508
Brassica napus C02 6 CH_bna_1196 3 21 0.00024981
Camellia sinensis var. sinensis Chr10 6 CH_camsi_1543 2 2 0.000962949
Carya illinoinensis Chr10 6 CH_cil_863 2 2 0.000929742
Carica papaya supercontig_81 6 CH_cpa_663 2 2 0.000950661
Helianthus annuus HanXRQChr15 6 CH_han_989 2 2 0.000231857
Olea europaea chr1 6 CH_oeu_668 2 2 0.000800683
Petunia axillaris Peaxi162Scf00074 6 CH_pax_630 2 2 0.000422134
Physcomitrium patens Chr03 6 CH_ppa_372 2 2 0.000612726
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1238 2 2 0.000239192
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_799 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001