Functional clusters
Information
- Type InterPro
- Description Fascin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_338 | 2 | 2 | 0.0000801989 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 5 | CH_atr_579 | 2 | 2 | 0.000476644 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_127 | 6 | 15 | 0.0000000000000105384 |
| Camellia sinensis var. sinensis | Chr9 | 5 | CH_camsi_683 | 3 | 4 | 0.00000208134 |
| Capsicum annuum | PGAv.1.6.scaffold181 | 5 | CH_can_695 | 2 | 2 | 0.000247831 |
| Citrus clementina | scaffold_7 | 5 | CH_ccl_717 | 2 | 2 | 0.000492187 |
| Carya illinoinensis | Chr06 | 5 | CH_cil_382 | 3 | 5 | 0.000000576209 |
| Eucalyptus grandis | Chr06 | 5 | CH_egr_450 | 4 | 4 | 0.0000000000421052 |
| Gossypium hirsutum | A02 | 5 | CH_ghi_493 | 4 | 22 | 0.000000206441 |
| Gossypium hirsutum | D03 | 5 | CH_ghi_540 | 4 | 27 | 0.000000495044 |
| Glycine max | Gm06 | 5 | CH_gma_364 | 3 | 3 | 0.000000356564 |
| Gossypium raimondii | Chr03 | 5 | CH_gra_245 | 4 | 25 | 0.0000000875903 |
| Helianthus annuus | HanXRQChr11 | 5 | CH_han_405 | 3 | 4 | 0.000000035838 |
| Lotus japonicus | chr1 | 5 | CH_lja_42 | 5 | 5 | 0.0000000000000247137 |
| Magnolia biondii | Chr05 | 5 | CH_mbi_508 | 3 | 8 | 0.000000792362 |
| Medicago truncatula | chr3 | 5 | CH_mtr_340 | 4 | 5 | 0.000000000218463 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_560 | 2 | 2 | 0.000481684 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_736 | 2 | 2 | 0.000782452 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_14 | 11 | 24 | 5.50116e-31 |
| Phaseolus vulgaris | Chr08 | 5 | CH_pvu_610 | 2 | 2 | 0.000440836 |
| Quercus lobata | 12 | 5 | CH_qlo_807 | 3 | 3 | 0.000000139945 |
| Simmondsia chinensis | GWHAASQ00000016 | 5 | CH_sci_526 | 2 | 2 | 0.000851426 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1493 | 3 | 8 | 0.0000167342 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_617 | 4 | 4 | 0.0000000000437034 |
| Selaginella moellendorffii | scaffold_84 | 5 | CH_smo_190 | 3 | 18 | 0.0000426334 |
| Trochodendron aralioides | group11 | 5 | CH_tar_883 | 2 | 2 | 0.000600366 |
| Theobroma cacao | Chromosome_8 | 5 | CH_tca_688 | 2 | 2 | 0.000439432 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_690 | 2 | 2 | 0.000454184 |
| Tripterygium wilfordii | NC_052234.1 | 5 | CH_twi_499 | 2 | 2 | 0.000557507 |
| Vanilla planifolia | CM028151.1 | 5 | CH_vpl_4 | 11 | 20 | 3.8144e-31 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_338 | 2 | 2 | 0.0000801989 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 6 | CH_atr_579 | 2 | 2 | 0.000476644 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_127 | 6 | 15 | 0.0000000000000105384 |
| Camellia sinensis var. sinensis | Chr9 | 6 | CH_camsi_683 | 3 | 4 | 0.00000208134 |
| Capsicum annuum | PGAv.1.6.scaffold181 | 6 | CH_can_695 | 2 | 2 | 0.000247831 |
| Citrus clementina | scaffold_7 | 6 | CH_ccl_717 | 2 | 2 | 0.000492187 |
| Carya illinoinensis | Chr06 | 6 | CH_cil_382 | 3 | 5 | 0.000000576209 |
| Eucalyptus grandis | Chr06 | 6 | CH_egr_450 | 4 | 4 | 0.0000000000421052 |
| Gossypium hirsutum | A02 | 6 | CH_ghi_493 | 4 | 22 | 0.000000206441 |
| Gossypium hirsutum | D03 | 6 | CH_ghi_540 | 4 | 27 | 0.000000495044 |
| Glycine max | Gm06 | 6 | CH_gma_364 | 3 | 3 | 0.000000356564 |
| Gossypium raimondii | Chr03 | 6 | CH_gra_245 | 4 | 25 | 0.0000000875903 |
| Helianthus annuus | HanXRQChr11 | 6 | CH_han_405 | 3 | 4 | 0.000000035838 |
| Lotus japonicus | chr1 | 6 | CH_lja_42 | 5 | 5 | 0.0000000000000247137 |
| Magnolia biondii | Chr05 | 6 | CH_mbi_508 | 3 | 8 | 0.000000792362 |
| Medicago truncatula | chr3 | 6 | CH_mtr_340 | 4 | 5 | 0.000000000218463 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_560 | 2 | 2 | 0.000481684 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_736 | 2 | 2 | 0.000782452 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_14 | 11 | 24 | 5.50116e-31 |
| Phaseolus vulgaris | Chr08 | 6 | CH_pvu_610 | 2 | 2 | 0.000440836 |
| Quercus lobata | 12 | 6 | CH_qlo_807 | 3 | 3 | 0.000000139945 |
| Simmondsia chinensis | GWHAASQ00000016 | 6 | CH_sci_526 | 2 | 2 | 0.000851426 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1493 | 3 | 8 | 0.0000167342 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_617 | 4 | 4 | 0.0000000000437034 |
| Selaginella moellendorffii | scaffold_84 | 6 | CH_smo_190 | 3 | 18 | 0.0000426334 |
| Trochodendron aralioides | group11 | 6 | CH_tar_883 | 2 | 2 | 0.000600366 |
| Theobroma cacao | Chromosome_8 | 6 | CH_tca_688 | 2 | 2 | 0.000439432 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_690 | 2 | 2 | 0.000454184 |
| Tripterygium wilfordii | NC_052234.1 | 6 | CH_twi_499 | 2 | 2 | 0.000557507 |
| Vanilla planifolia | CM028151.1 | 6 | CH_vpl_4 | 11 | 20 | 3.8144e-31 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |