Functional clusters
Information
- Type InterPro
- Description Chromophore lyase CpcT/CpeT
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Camellia sinensis var. sinensis | Chr2 | 5 | CH_camsi_1209 | 2 | 2 | 0.000275128 |
Durio zibethinus | NW_019167827.1 | 5 | CH_dzi_441 | 2 | 2 | 0.000139047 |
Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_611 | 2 | 3 | 0.000134614 |
Magnolia biondii | Chr07 | 5 | CH_mbi_346 | 3 | 5 | 0.0000000353791 |
Simmondsia chinensis | GWHAASQ00000004 | 5 | CH_sci_137 | 3 | 6 | 0.000000217459 |
Sequoiadendron giganteum | chr4 | 5 | CH_sgi_2382 | 2 | 3 | 0.000438418 |
Camellia sinensis var. sinensis | Chr2 | 6 | CH_camsi_1209 | 2 | 2 | 0.000275128 |
Durio zibethinus | NW_019167827.1 | 6 | CH_dzi_441 | 2 | 2 | 0.000139047 |
Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_611 | 2 | 3 | 0.000134614 |
Magnolia biondii | Chr07 | 6 | CH_mbi_346 | 3 | 5 | 0.0000000353791 |
Simmondsia chinensis | GWHAASQ00000004 | 6 | CH_sci_137 | 3 | 6 | 0.000000217459 |
Sequoiadendron giganteum | chr4 | 6 | CH_sgi_2382 | 2 | 3 | 0.000438418 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |