Functional clusters

Information

  • Type InterPro
  • Description Tyrosyl-DNA phosphodiesterase I

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_755 2 2 0.000211491
Brassica carinata ChrB05 5 CH_bca_1436 2 2 0.000128259
Camellia sinensis var. sinensis Chr15 5 CH_camsi_753 3 11 0.00000520181
Coffea canephora chr2 5 CH_ccan_360 2 5 0.00003833
Corchorus olitorius AWUE01023871.1 5 CH_col_219 2 2 0.000876296
Carica papaya supercontig_13 5 CH_cpa_494 2 2 0.000285198
Davidia involucrata GWHABJS00000016 5 CH_din_658 2 2 0.000300075
Magnolia biondii Chr11 5 CH_mbi_303 4 16 0.00000000937531
Petunia axillaris Peaxi162Scf00314 5 CH_pax_544 2 2 0.000211067
Quercus lobata 10 5 CH_qlo_1586 2 2 0.000309773
Trochodendron aralioides group8 5 CH_tar_780 2 2 0.00036022
Utricularia gibba unitig_748 5 CH_ugi_149 2 2 0.0000820479
Vanilla planifolia CM028157.1 5 CH_vpl_538 2 2 0.000221664
Acer truncatum chr6 6 CH_acertr_755 2 2 0.000211491
Brassica carinata ChrB05 6 CH_bca_1436 2 2 0.000128259
Camellia sinensis var. sinensis Chr15 6 CH_camsi_753 3 11 0.00000520181
Coffea canephora chr2 6 CH_ccan_360 2 5 0.00003833
Corchorus olitorius AWUE01023871.1 6 CH_col_219 2 2 0.000876296
Carica papaya supercontig_13 6 CH_cpa_494 2 2 0.000285198
Davidia involucrata GWHABJS00000016 6 CH_din_658 2 2 0.000300075
Magnolia biondii Chr11 6 CH_mbi_303 4 16 0.00000000937531
Petunia axillaris Peaxi162Scf00314 6 CH_pax_544 2 2 0.000211067
Quercus lobata 10 6 CH_qlo_1586 2 2 0.000309773
Trochodendron aralioides group8 6 CH_tar_780 2 2 0.00036022
Utricularia gibba unitig_748 6 CH_ugi_149 2 2 0.0000820479
Vanilla planifolia CM028157.1 6 CH_vpl_538 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001