Functional clusters
Information
- Type InterPro
- Description DNA helicase Pif1-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 5 | CH_bvu_185 | 8 | 47 | 0.000000165899 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_171 | 5 | 7 | 0.00000000156441 |
| Manihot esculenta | Chromosome10 | 5 | CH_mes_604 | 4 | 68 | 0.000271424 |
| Medicago truncatula | scaffold0003 | 5 | CH_mtr_1215 | 4 | 7 | 0.000291933 |
| Medicago truncatula | chr1 | 5 | CH_mtr_580 | 5 | 6 | 0.000000179916 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_334 | 3 | 21 | 0.0000185016 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_1185 | 3 | 3 | 0.000612474 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_693 | 4 | 5 | 0.00000575239 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 6 | CH_bvu_185 | 8 | 47 | 0.000000165899 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_171 | 5 | 7 | 0.00000000156441 |
| Manihot esculenta | Chromosome10 | 6 | CH_mes_604 | 4 | 68 | 0.000271424 |
| Medicago truncatula | scaffold0003 | 6 | CH_mtr_1215 | 4 | 7 | 0.000291933 |
| Medicago truncatula | chr1 | 6 | CH_mtr_580 | 5 | 6 | 0.000000179916 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_334 | 3 | 21 | 0.0000185016 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_1185 | 3 | 3 | 0.000612474 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_693 | 4 | 5 | 0.00000575239 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |