Functional clusters
Information
- Type InterPro
- Description Haem peroxidase superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_68 | 7 | 8 | 0.000000000000719547 |
| Actinidia chinensis | Lachesis_group10 | 5 | CH_ach_168 | 4 | 4 | 0.00000140414 |
| Ceratophyllum demersum | 10 | 5 | CH_cde_100 | 6 | 12 | 0.000000371562 |
| Gossypium hirsutum | D09 | 5 | CH_ghi_407 | 5 | 5 | 0.0000000204484 |
| Lonicera japonica | GWHAAZE00000003 | 5 | CH_lonja_130 | 9 | 10 | 2.44708e-17 |
| Marchantia polymorpha | scaffold_47 | 5 | CH_mpo_38 | 7 | 7 | 0.0000000000795316 |
| Nelumbo nucifera | chr7 | 5 | CH_nnu_341 | 5 | 15 | 0.0000198607 |
| Quercus lobata | 3 | 5 | CH_qlo_35 | 19 | 25 | 2.34989e-36 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_698 | 9 | 26 | 0.000000000467393 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_768 | 3 | 3 | 0.000977485 |
| Vitis vinifera | chr12 | 5 | CH_vvi_136 | 7 | 9 | 0.00000000000408136 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_68 | 7 | 8 | 0.000000000000719547 |
| Actinidia chinensis | Lachesis_group10 | 6 | CH_ach_168 | 4 | 4 | 0.00000140414 |
| Ceratophyllum demersum | 10 | 6 | CH_cde_100 | 6 | 12 | 0.000000371562 |
| Gossypium hirsutum | D09 | 6 | CH_ghi_407 | 5 | 5 | 0.0000000204484 |
| Lonicera japonica | GWHAAZE00000003 | 6 | CH_lonja_130 | 9 | 10 | 2.44708e-17 |
| Marchantia polymorpha | scaffold_47 | 6 | CH_mpo_38 | 7 | 7 | 0.0000000000795316 |
| Nelumbo nucifera | chr7 | 6 | CH_nnu_341 | 5 | 15 | 0.0000198607 |
| Quercus lobata | 3 | 6 | CH_qlo_35 | 19 | 25 | 2.34989e-36 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_698 | 9 | 26 | 0.000000000467393 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_768 | 3 | 3 | 0.000977485 |
| Vitis vinifera | chr12 | 6 | CH_vvi_136 | 7 | 9 | 0.00000000000408136 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |