Functional clusters
Information
- Type InterPro
- Description Ferredoxin [2Fe-2S], plant
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cannabis sativa | NC_044377.1 | 5 | CH_cansat_285 | 3 | 6 | 0.00000258633 |
| Capsicum annuum | PGAv.1.6.scaffold798 | 5 | CH_can_352 | 3 | 4 | 0.000000818863 |
| Corylus avellana | 1 | 5 | CH_cav_733 | 2 | 2 | 0.000460017 |
| Coffea canephora | chr1 | 5 | CH_ccan_495 | 2 | 3 | 0.000127766 |
| Citrullus lanatus | CG_Chr05 | 5 | CH_cla_347 | 2 | 2 | 0.000532269 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_825 | 2 | 2 | 0.000673083 |
| Glycine max | Gm12 | 5 | CH_gma_379 | 3 | 3 | 0.000000618044 |
| Magnolia biondii | Chr09 | 5 | CH_mbi_1030 | 2 | 2 | 0.000291397 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_305 | 3 | 3 | 0.000000195763 |
| Physcomitrium patens | Chr04 | 5 | CH_ppa_124 | 3 | 9 | 0.0000396969 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_268 | 3 | 3 | 0.000000283418 |
| Selenicereus undatus | Scaffold_33676 | 5 | CH_sun_354 | 2 | 3 | 0.000653935 |
| Tripterygium wilfordii | NC_052252.1 | 5 | CH_twi_527 | 2 | 2 | 0.00083626 |
| Vigna mungo | CM024075.1 | 5 | CH_vmu_67 | 4 | 4 | 0.0000000000283278 |
| Cannabis sativa | NC_044377.1 | 6 | CH_cansat_285 | 3 | 6 | 0.00000258633 |
| Capsicum annuum | PGAv.1.6.scaffold798 | 6 | CH_can_352 | 3 | 4 | 0.000000818863 |
| Corylus avellana | 1 | 6 | CH_cav_733 | 2 | 2 | 0.000460017 |
| Coffea canephora | chr1 | 6 | CH_ccan_495 | 2 | 3 | 0.000127766 |
| Citrullus lanatus | CG_Chr05 | 6 | CH_cla_347 | 2 | 2 | 0.000532269 |
| Cucumis melo | chr06 | 6 | CH_cme_218 | 3 | 6 | 0.00000266945 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_825 | 2 | 2 | 0.000673083 |
| Glycine max | Gm12 | 6 | CH_gma_379 | 3 | 3 | 0.000000618044 |
| Magnolia biondii | Chr09 | 6 | CH_mbi_1030 | 2 | 2 | 0.000291397 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_305 | 3 | 3 | 0.000000195763 |
| Physcomitrium patens | Chr04 | 6 | CH_ppa_124 | 3 | 9 | 0.0000396969 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_268 | 3 | 3 | 0.000000283418 |
| Selenicereus undatus | Scaffold_33676 | 6 | CH_sun_354 | 2 | 3 | 0.000653935 |
| Tripterygium wilfordii | NC_052252.1 | 6 | CH_twi_527 | 2 | 2 | 0.00083626 |
| Vigna mungo | CM024075.1 | 6 | CH_vmu_67 | 4 | 4 | 0.0000000000283278 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |