Functional clusters
Information
- Type InterPro
- Description Amidase, carbamoylase-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_526 | 2 | 3 | 0.000721742 |
| Coffea canephora | chr9 | 5 | CH_ccan_425 | 2 | 4 | 0.0000766598 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_415 | 3 | 10 | 0.00000484272 |
| Eutrema salsugineum | scaffold_1 | 5 | CH_esa_482 | 2 | 3 | 0.000685305 |
| Hydrangea macrophylla | Hma1.2p1_0088F.1 | 5 | CH_hma_281 | 2 | 2 | 0.000111086 |
| Lupinus albus | Lalb_Chr02 | 5 | CH_lal_750 | 2 | 2 | 0.000787236 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_528 | 2 | 2 | 0.00015649 |
| Quercus lobata | 11 | 5 | CH_qlo_760 | 3 | 4 | 0.0000000639718 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_20 | 16 | 59 | 1.45208e-37 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_889 | 5 | 74 | 0.0000158247 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_2400 | 2 | 2 | 0.000487151 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_983 | 3 | 3 | 0.0000000355983 |
| Vanilla planifolia | CM028158.1 | 5 | CH_vpl_673 | 2 | 3 | 0.000664951 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_526 | 2 | 3 | 0.000721742 |
| Coffea canephora | chr9 | 6 | CH_ccan_425 | 2 | 4 | 0.0000766598 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_415 | 3 | 10 | 0.00000484272 |
| Eutrema salsugineum | scaffold_1 | 6 | CH_esa_482 | 2 | 3 | 0.000685305 |
| Hydrangea macrophylla | Hma1.2p1_0088F.1 | 6 | CH_hma_281 | 2 | 2 | 0.000111086 |
| Lupinus albus | Lalb_Chr02 | 6 | CH_lal_750 | 2 | 2 | 0.000787236 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_528 | 2 | 2 | 0.00015649 |
| Quercus lobata | 11 | 6 | CH_qlo_760 | 3 | 4 | 0.0000000639718 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_20 | 16 | 59 | 1.45208e-37 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_889 | 5 | 74 | 0.0000158247 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_2400 | 2 | 2 | 0.000487151 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_983 | 3 | 3 | 0.0000000355983 |
| Vanilla planifolia | CM028158.1 | 6 | CH_vpl_673 | 2 | 3 | 0.000664951 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |