Functional clusters

Information

  • Type InterPro
  • Description L-gulonolactone oxidase, plant

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr2 5 CH_ath_193 3 3 0.0000000430914
Brassica carinata ChrC02 5 CH_bca_545 3 3 0.000000113097
Brassica napus C02 5 CH_bna_855 3 10 0.000017727
Brassica oleracea C4 5 CH_bol_777 2 2 0.000490292
Brassica rapa A05 5 CH_bra_140 3 3 0.0000000552942
Cannabis sativa NC_044371.1 5 CH_cansat_74 5 12 0.000000000000662452
Corylus avellana 11 5 CH_cav_638 2 2 0.000230008
Coffea canephora chr11 5 CH_ccan_280 3 64 0.00000884225
Carpinus fangiana Cfa01 5 CH_cfa_494 2 2 0.000227204
Cardamine hirsuta Chr4 5 CH_chi_782 2 2 0.000691204
Corchorus olitorius AWUE01016487.1 5 CH_col_152 2 2 0.000292099
Capsella rubella scaffold_4 5 CH_cru_246 3 3 0.000000160382
Eutrema salsugineum scaffold_22 5 CH_esa_519 2 2 0.000761499
Eutrema salsugineum scaffold_4 5 CH_esa_520 2 2 0.000761499
Fragaria vesca Fvb7 5 CH_fve_642 2 2 0.00017673
Glycine max Gm16 5 CH_gma_340 3 3 0.000000121016
Helianthus annuus HanXRQChr09 5 CH_han_511 3 5 0.000000447934
Lupinus albus Lalb_Chr03 5 CH_lal_692 2 2 0.000524824
Lupinus albus Lalb_Chr24 5 CH_lal_693 2 2 0.000524824
Lotus japonicus chr1 5 CH_lja_528 2 2 0.000429046
Magnolia biondii Chr09 5 CH_mbi_680 3 11 0.0000204166
Malus domestica Chr01 5 CH_mdo_1238 2 2 0.000379212
Punica granatum NC_045131.1 5 CH_pgr_505 2 2 0.000225107
Pisum sativum chr6LG2 5 CH_psa_621 2 2 0.000312981
Populus trichocarpa Chr02 5 CH_ptr_618 2 2 0.0001734
Quercus lobata 8 5 CH_qlo_696 3 3 0.0000000159937
Rhododendron simsii chr01 5 CH_rsi_398 3 4 0.0000000999387
Salvia bowleyana GWHASIU00000001 5 CH_sbo_281 4 33 0.0000000577453
Selaginella moellendorffii scaffold_52 5 CH_smo_334 4 47 0.000583048
Schrenkiella parvula ch4-6 5 CH_spa_113 3 3 0.000000185978
Tripterygium wilfordii NC_052239.1 5 CH_twi_481 2 3 0.000501733
Utricularia gibba unitig_61 5 CH_ugi_252 2 2 0.000246144
Arabidopsis thaliana Chr2 6 CH_ath_193 3 3 0.0000000430914
Brassica carinata ChrC02 6 CH_bca_545 3 3 0.000000113097
Brassica napus C02 6 CH_bna_855 3 10 0.000017727
Brassica oleracea C4 6 CH_bol_777 2 2 0.000490292
Brassica rapa A05 6 CH_bra_140 3 3 0.0000000552942
Cannabis sativa NC_044371.1 6 CH_cansat_74 5 12 0.000000000000662452
Corylus avellana 11 6 CH_cav_638 2 2 0.000230008
Coffea canephora chr11 6 CH_ccan_280 3 64 0.00000884225
Carpinus fangiana Cfa01 6 CH_cfa_494 2 2 0.000227204
Cardamine hirsuta Chr4 6 CH_chi_782 2 2 0.000691204
Corchorus olitorius AWUE01016487.1 6 CH_col_152 2 2 0.000292099
Capsella rubella scaffold_4 6 CH_cru_246 3 3 0.000000160382
Eutrema salsugineum scaffold_22 6 CH_esa_519 2 2 0.000761499
Eutrema salsugineum scaffold_4 6 CH_esa_520 2 2 0.000761499
Fragaria vesca Fvb7 6 CH_fve_642 2 2 0.00017673
Glycine max Gm16 6 CH_gma_340 3 3 0.000000121016
Helianthus annuus HanXRQChr09 6 CH_han_511 3 5 0.000000447934
Lupinus albus Lalb_Chr03 6 CH_lal_692 2 2 0.000524824
Lupinus albus Lalb_Chr24 6 CH_lal_693 2 2 0.000524824
Lotus japonicus chr1 6 CH_lja_528 2 2 0.000429046
Magnolia biondii Chr09 6 CH_mbi_680 3 11 0.0000204166
Malus domestica Chr01 6 CH_mdo_1238 2 2 0.000379212
Punica granatum NC_045131.1 6 CH_pgr_505 2 2 0.000225107
Pisum sativum chr6LG2 6 CH_psa_621 2 2 0.000312981
Populus trichocarpa Chr02 6 CH_ptr_618 2 2 0.0001734
Quercus lobata 8 6 CH_qlo_696 3 3 0.0000000159937
Rhododendron simsii chr01 6 CH_rsi_398 3 4 0.0000000999387
Salvia bowleyana GWHASIU00000001 6 CH_sbo_281 4 33 0.0000000577453
Selaginella moellendorffii scaffold_52 6 CH_smo_334 4 47 0.000583048
Schrenkiella parvula ch4-6 6 CH_spa_113 3 3 0.000000185978
Tripterygium wilfordii NC_052239.1 6 CH_twi_481 2 3 0.000501733
Utricularia gibba unitig_61 6 CH_ugi_252 2 2 0.000246144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001