Functional clusters
Information
- Type InterPro
- Description Acid phosphatase, plant
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_268 | 3 | 3 | 0.000000548948 |
| Citrus clementina | scaffold_7 | 5 | CH_ccl_331 | 3 | 3 | 0.000000353292 |
| Ceratophyllum demersum | 3 | 5 | CH_cde_491 | 2 | 2 | 0.000789796 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_594 | 2 | 2 | 0.000757346 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_595 | 2 | 2 | 0.000757346 |
| Carya illinoinensis | Chr01 | 5 | CH_cil_854 | 2 | 2 | 0.000929742 |
| Capsella rubella | scaffold_7 | 5 | CH_cru_361 | 3 | 5 | 0.00000961852 |
| Daucus carota | DCARv2_Chr6 | 5 | CH_dca_664 | 2 | 2 | 0.000637775 |
| Eucalyptus grandis | Chr10 | 5 | CH_egr_830 | 3 | 3 | 0.00000113044 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_908 | 3 | 4 | 0.00000452072 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_330 | 3 | 3 | 0.000000182202 |
| Helianthus annuus | HanXRQChr09 | 5 | CH_han_322 | 4 | 8 | 0.00000000254376 |
| Malus domestica | Chr09 | 5 | CH_mdo_697 | 3 | 8 | 0.0000067615 |
| Papaver somniferum | NC_039359.1 | 5 | CH_pso_378 | 4 | 15 | 0.00000000982705 |
| Quercus lobata | 5 | 5 | CH_qlo_1542 | 3 | 21 | 0.000297145 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_396 | 4 | 8 | 0.000000000931068 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1071 | 3 | 3 | 0.000000124594 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_332 | 3 | 3 | 0.000000289388 |
| Trochodendron aralioides | group9 | 5 | CH_tar_328 | 3 | 4 | 0.000000756855 |
| Utricularia gibba | unitig_0 | 5 | CH_ugi_231 | 2 | 2 | 0.000246144 |
| Vanilla planifolia | CM028155.1 | 5 | CH_vpl_516 | 2 | 2 | 0.000221664 |
| Zea mays | 6 | 5 | CH_zma_425 | 2 | 2 | 0.000306788 |
| Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_268 | 3 | 3 | 0.000000548948 |
| Citrus clementina | scaffold_7 | 6 | CH_ccl_331 | 3 | 3 | 0.000000353292 |
| Ceratophyllum demersum | 3 | 6 | CH_cde_491 | 2 | 2 | 0.000789796 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_594 | 2 | 2 | 0.000757346 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_595 | 2 | 2 | 0.000757346 |
| Carya illinoinensis | Chr01 | 6 | CH_cil_854 | 2 | 2 | 0.000929742 |
| Capsella rubella | scaffold_7 | 6 | CH_cru_361 | 3 | 5 | 0.00000961852 |
| Daucus carota | DCARv2_Chr6 | 6 | CH_dca_664 | 2 | 2 | 0.000637775 |
| Eucalyptus grandis | Chr10 | 6 | CH_egr_830 | 3 | 3 | 0.00000113044 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_908 | 3 | 4 | 0.00000452072 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_330 | 3 | 3 | 0.000000182202 |
| Helianthus annuus | HanXRQChr09 | 6 | CH_han_322 | 4 | 8 | 0.00000000254376 |
| Malus domestica | Chr09 | 6 | CH_mdo_697 | 3 | 8 | 0.0000067615 |
| Papaver somniferum | NC_039359.1 | 6 | CH_pso_378 | 4 | 15 | 0.00000000982705 |
| Quercus lobata | 5 | 6 | CH_qlo_1542 | 3 | 21 | 0.000297145 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_396 | 4 | 8 | 0.000000000931068 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1071 | 3 | 3 | 0.000000124594 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_332 | 3 | 3 | 0.000000289388 |
| Trochodendron aralioides | group9 | 6 | CH_tar_328 | 3 | 4 | 0.000000756855 |
| Utricularia gibba | unitig_0 | 6 | CH_ugi_231 | 2 | 2 | 0.000246144 |
| Vanilla planifolia | CM028155.1 | 6 | CH_vpl_516 | 2 | 2 | 0.000221664 |
| Zea mays | 6 | 6 | CH_zma_425 | 2 | 2 | 0.000306788 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |