Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF1442
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 5 | CH_acertr_300 | 3 | 3 | 0.0000001491 |
| Avicennia marina | ScioBoG_8578_HRSCAF_8617 | 5 | CH_ama_196 | 2 | 2 | 0.000517331 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_465 | 2 | 4 | 0.000481155 |
| Amborella trichopoda | AmTr_v1.0_scaffold00041 | 5 | CH_atr_641 | 2 | 2 | 0.000794407 |
| Amborella trichopoda | AmTr_v1.0_scaffold00099 | 5 | CH_atr_642 | 2 | 2 | 0.000794407 |
| Brassica napus | A09 | 5 | CH_bna_423 | 4 | 11 | 0.0000000672028 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 5 | CH_bvu_473 | 2 | 2 | 0.00049675 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_528 | 2 | 2 | 0.000393985 |
| Capsicum annuum | PGAv.1.6.scaffold388 | 5 | CH_can_406 | 3 | 5 | 0.00000358182 |
| Coffea canephora | chr2 | 5 | CH_ccan_651 | 2 | 4 | 0.000536612 |
| Coffea canephora | chr2 | 5 | CH_ccan_652 | 2 | 4 | 0.000536612 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_776 | 2 | 2 | 0.000820311 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1130 | 5 | CH_cqu_1070 | 2 | 2 | 0.000995025 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3256 | 5 | CH_cqu_1071 | 2 | 2 | 0.000995025 |
| Durio zibethinus | NW_019167938.1 | 5 | CH_dzi_638 | 2 | 2 | 0.000973326 |
| Erythranthe guttata | scaffold_6 | 5 | CH_egut_725 | 2 | 2 | 0.000728147 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_467 | 3 | 3 | 0.000000188156 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 5 | CH_lsa_823 | 2 | 2 | 0.000514007 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_1218 | 2 | 2 | 0.000728491 |
| Malus domestica | Chr07 | 5 | CH_mdo_1406 | 2 | 2 | 0.000796344 |
| Manihot esculenta | Chromosome02 | 5 | CH_mes_343 | 4 | 22 | 0.00000104604 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_116 | 5 | 23 | 0.000000000234993 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_605 | 3 | 10 | 0.00000182681 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_676 | 3 | 13 | 0.00000435343 |
| Rhododendron simsii | chr09 | 5 | CH_rsi_885 | 2 | 2 | 0.000387184 |
| Striga asiatica | scaffold2 | 5 | CH_sas_18 | 5 | 24 | 0.000000000272512 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_289 | 4 | 36 | 0.0000000831151 |
| Selenicereus undatus | Scaffold_19641 | 5 | CH_sun_139 | 3 | 7 | 0.00000969678 |
| Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_796 | 2 | 2 | 0.000929238 |
| Acer truncatum | chr5 | 6 | CH_acertr_300 | 3 | 3 | 0.0000001491 |
| Avicennia marina | ScioBoG_8578_HRSCAF_8617 | 6 | CH_ama_196 | 2 | 2 | 0.000517331 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_465 | 2 | 4 | 0.000481155 |
| Amborella trichopoda | AmTr_v1.0_scaffold00041 | 6 | CH_atr_641 | 2 | 2 | 0.000794407 |
| Amborella trichopoda | AmTr_v1.0_scaffold00099 | 6 | CH_atr_642 | 2 | 2 | 0.000794407 |
| Brassica napus | A09 | 6 | CH_bna_423 | 4 | 11 | 0.0000000672028 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 6 | CH_bvu_473 | 2 | 2 | 0.00049675 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_528 | 2 | 2 | 0.000393985 |
| Capsicum annuum | PGAv.1.6.scaffold388 | 6 | CH_can_406 | 3 | 5 | 0.00000358182 |
| Coffea canephora | chr2 | 6 | CH_ccan_651 | 2 | 4 | 0.000536612 |
| Coffea canephora | chr2 | 6 | CH_ccan_652 | 2 | 4 | 0.000536612 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_776 | 2 | 2 | 0.000820311 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1130 | 6 | CH_cqu_1070 | 2 | 2 | 0.000995025 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3256 | 6 | CH_cqu_1071 | 2 | 2 | 0.000995025 |
| Durio zibethinus | NW_019167938.1 | 6 | CH_dzi_638 | 2 | 2 | 0.000973326 |
| Erythranthe guttata | scaffold_6 | 6 | CH_egut_725 | 2 | 2 | 0.000728147 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_467 | 3 | 3 | 0.000000188156 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 6 | CH_lsa_823 | 2 | 2 | 0.000514007 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_1218 | 2 | 2 | 0.000728491 |
| Malus domestica | Chr07 | 6 | CH_mdo_1406 | 2 | 2 | 0.000796344 |
| Manihot esculenta | Chromosome02 | 6 | CH_mes_343 | 4 | 22 | 0.00000104604 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_116 | 5 | 23 | 0.000000000234993 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_605 | 3 | 10 | 0.00000182681 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_676 | 3 | 13 | 0.00000435343 |
| Rhododendron simsii | chr09 | 6 | CH_rsi_885 | 2 | 2 | 0.000387184 |
| Striga asiatica | scaffold2 | 6 | CH_sas_18 | 5 | 24 | 0.000000000272512 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_289 | 4 | 36 | 0.0000000831151 |
| Selenicereus undatus | Scaffold_19641 | 6 | CH_sun_139 | 3 | 7 | 0.00000969678 |
| Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_796 | 2 | 2 | 0.000929238 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |