Functional clusters
Information
- Type InterPro
- Description Glyoxal oxidase, N-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_362 | 5 | CH_aag_241 | 3 | 13 | 0.000154454 |
| Acer truncatum | chr13 | 5 | CH_acertr_158 | 4 | 4 | 0.00000000143487 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 5 | CH_amhyb_136 | 3 | 3 | 0.00000127543 |
| Brassica carinata | ChrB03 | 5 | CH_bca_846 | 5 | 74 | 0.00000200786 |
| Brassica napus | C07 | 5 | CH_bna_1252 | 3 | 11 | 0.000311114 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 5 | CH_bvu_201 | 3 | 3 | 0.000000359875 |
| Cannabis sativa | NC_044370.1 | 5 | CH_cansat_254 | 3 | 3 | 0.000000776147 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_443 | 3 | 5 | 0.0000166456 |
| Carya illinoinensis | Chr08 | 5 | CH_cil_229 | 4 | 4 | 0.000000000510836 |
| Corchorus olitorius | AWUE01019218.1 | 5 | CH_col_16 | 6 | 7 | 0.0000000000000281589 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1566 | 5 | CH_cqu_427 | 3 | 3 | 0.00000122584 |
| Chlamydomonas reinhardtii | chromosome_11 | 5 | CH_cre_60 | 3 | 3 | 0.00000320166 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_27 | 7 | 7 | 1.09673e-19 |
| Helianthus annuus | HanXRQChr09 | 5 | CH_han_58 | 11 | 55 | 1.86405e-21 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_109 | 6 | 9 | 0.0000000000000505521 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_500 | 3 | 3 | 0.00000610324 |
| Manihot esculenta | Chromosome16 | 5 | CH_mes_333 | 3 | 3 | 0.000000671187 |
| Petunia axillaris | Peaxi162Scf00287 | 5 | CH_pax_112 | 4 | 4 | 0.000000000517213 |
| Physcomitrium patens | Chr08 | 5 | CH_ppa_46 | 4 | 4 | 0.0000000936923 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_1178 | 3 | 13 | 0.00056499 |
| Papaver somniferum | NW_020623156.1 | 5 | CH_pso_306 | 5 | 18 | 0.00000000108613 |
| Rhododendron simsii | chr03 | 5 | CH_rsi_678 | 2 | 2 | 0.0000645307 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1079 | 3 | 3 | 0.000000124594 |
| Solanum pennellii | Spenn-ch04 | 5 | CH_spe_125 | 4 | 4 | 0.0000000000871225 |
| Solanum tuberosum | ST4.03ch04 | 5 | CH_stu_197 | 4 | 4 | 0.0000000000847881 |
| Trochodendron aralioides | group4 | 5 | CH_tar_135 | 4 | 4 | 0.000000000464211 |
| Theobroma cacao | Chromosome_8 | 5 | CH_tca_358 | 3 | 3 | 0.000000675875 |
| Tarenaya hassleriana | NW_010965304.1 | 5 | CH_tha_154 | 3 | 3 | 0.00000332977 |
| Tarenaya hassleriana | NW_010965372.1 | 5 | CH_tha_155 | 3 | 3 | 0.00000332977 |
| Anthoceros agrestis | Sc2ySwM_362 | 6 | CH_aag_241 | 3 | 13 | 0.000154454 |
| Acer truncatum | chr13 | 6 | CH_acertr_158 | 4 | 4 | 0.00000000143487 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 6 | CH_amhyb_136 | 3 | 3 | 0.00000127543 |
| Brassica carinata | ChrB03 | 6 | CH_bca_846 | 5 | 74 | 0.00000200786 |
| Brassica napus | C07 | 6 | CH_bna_1252 | 3 | 11 | 0.000311114 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 6 | CH_bvu_201 | 3 | 3 | 0.000000359875 |
| Cannabis sativa | NC_044370.1 | 6 | CH_cansat_254 | 3 | 3 | 0.000000776147 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_443 | 3 | 5 | 0.0000166456 |
| Carya illinoinensis | Chr08 | 6 | CH_cil_229 | 4 | 4 | 0.000000000510836 |
| Corchorus olitorius | AWUE01019218.1 | 6 | CH_col_16 | 6 | 7 | 0.0000000000000281589 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1566 | 6 | CH_cqu_427 | 3 | 3 | 0.00000122584 |
| Chlamydomonas reinhardtii | chromosome_11 | 6 | CH_cre_60 | 3 | 3 | 0.00000320166 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_27 | 7 | 7 | 1.09673e-19 |
| Helianthus annuus | HanXRQChr09 | 6 | CH_han_58 | 11 | 55 | 1.86405e-21 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_109 | 6 | 9 | 0.0000000000000505521 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_500 | 3 | 3 | 0.00000610324 |
| Manihot esculenta | Chromosome16 | 6 | CH_mes_333 | 3 | 3 | 0.000000671187 |
| Petunia axillaris | Peaxi162Scf00287 | 6 | CH_pax_112 | 4 | 4 | 0.000000000517213 |
| Physcomitrium patens | Chr08 | 6 | CH_ppa_46 | 4 | 4 | 0.0000000936923 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_1178 | 3 | 13 | 0.00056499 |
| Papaver somniferum | NW_020623156.1 | 6 | CH_pso_306 | 5 | 18 | 0.00000000108613 |
| Rhododendron simsii | chr03 | 6 | CH_rsi_678 | 2 | 2 | 0.0000645307 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1079 | 3 | 3 | 0.000000124594 |
| Solanum pennellii | Spenn-ch04 | 6 | CH_spe_125 | 4 | 4 | 0.0000000000871225 |
| Solanum tuberosum | ST4.03ch04 | 6 | CH_stu_197 | 4 | 4 | 0.0000000000847881 |
| Trochodendron aralioides | group4 | 6 | CH_tar_135 | 4 | 4 | 0.000000000464211 |
| Theobroma cacao | Chromosome_8 | 6 | CH_tca_358 | 3 | 3 | 0.000000675875 |
| Tarenaya hassleriana | NW_010965304.1 | 6 | CH_tha_154 | 3 | 3 | 0.00000332977 |
| Tarenaya hassleriana | NW_010965372.1 | 6 | CH_tha_155 | 3 | 3 | 0.00000332977 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |