Functional clusters

Information

  • Type InterPro
  • Description Domain of unknown function DUF1338

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 5 CH_aly_106 4 4 0.0000000000301961
Arabidopsis thaliana Chr1 5 CH_ath_498 2 3 0.000257837
Brassica carinata ChrC06 5 CH_bca_660 3 4 0.000000452353
Brassica napus A07 5 CH_bna_708 3 6 0.00000376139
Brassica napus C07 5 CH_bna_96 5 6 0.0000000000000106938
Brassica oleracea C7 5 CH_bol_151 4 11 0.00000000241901
Brassica rapa A07 5 CH_bra_171 3 4 0.000000221161
Cardamine hirsuta Chr1 5 CH_chi_609 2 2 0.000207361
Chenopodium quinoa C_Quinoa_Scaffold_4244 5 CH_cqu_896 2 3 0.000426422
Capsella rubella scaffold_1 5 CH_cru_535 2 2 0.000219346
Eutrema salsugineum scaffold_5 5 CH_esa_181 3 3 0.000000173971
Lonicera japonica GWHAAZE00000006 5 CH_lonja_1018 2 4 0.000359303
Schrenkiella parvula ch1-1 5 CH_spa_94 3 3 0.0000000371957
Arabidopsis lyrata scaffold_1 6 CH_aly_106 4 4 0.0000000000301961
Arabidopsis thaliana Chr1 6 CH_ath_498 2 3 0.000257837
Brassica carinata ChrC06 6 CH_bca_660 3 4 0.000000452353
Brassica napus A07 6 CH_bna_708 3 6 0.00000376139
Brassica napus C07 6 CH_bna_96 5 6 0.0000000000000106938
Brassica oleracea C7 6 CH_bol_151 4 11 0.00000000241901
Brassica rapa A07 6 CH_bra_171 3 4 0.000000221161
Cardamine hirsuta Chr1 6 CH_chi_609 2 2 0.000207361
Chenopodium quinoa C_Quinoa_Scaffold_4244 6 CH_cqu_896 2 3 0.000426422
Capsella rubella scaffold_1 6 CH_cru_535 2 2 0.000219346
Eutrema salsugineum scaffold_5 6 CH_esa_181 3 3 0.000000173971
Lonicera japonica GWHAAZE00000006 6 CH_lonja_1018 2 4 0.000359303
Schrenkiella parvula ch1-1 6 CH_spa_94 3 3 0.0000000371957

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001