Functional clusters

Information

  • Type InterPro
  • Description Protein EARLY FLOWERING 4 domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr2_EL10_PGA_scaffold6 5 CH_bvu_512 2 3 0.000745074
Citrus clementina scaffold_7 5 CH_ccl_775 2 2 0.000820311
Chenopodium quinoa C_Quinoa_Scaffold_1995 5 CH_cqu_1000 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3378 5 CH_cqu_1001 2 2 0.000710732
Eutrema salsugineum scaffold_4 5 CH_esa_187 3 3 0.000000304449
Olea europaea chr13 5 CH_oeu_276 3 9 0.0000301313
Petunia axillaris Peaxi162Scf00825 5 CH_pax_216 3 3 0.00000025988
Sequoiadendron giganteum chr6 5 CH_sgi_2081 2 2 0.000146145
Solanum lycopersicum SL4.0ch06 5 CH_sly_947 2 2 0.000880411
Solanum pennellii Spenn-ch06 5 CH_spe_796 2 2 0.00044479
Solanum tuberosum ST4.03ch06 5 CH_stu_560 3 13 0.0000393912
Beta vulgaris Chr2_EL10_PGA_scaffold6 6 CH_bvu_512 2 3 0.000745074
Citrus clementina scaffold_7 6 CH_ccl_775 2 2 0.000820311
Chenopodium quinoa C_Quinoa_Scaffold_1995 6 CH_cqu_1000 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3378 6 CH_cqu_1001 2 2 0.000710732
Eutrema salsugineum scaffold_4 6 CH_esa_187 3 3 0.000000304449
Olea europaea chr13 6 CH_oeu_276 3 9 0.0000301313
Petunia axillaris Peaxi162Scf00825 6 CH_pax_216 3 3 0.00000025988
Sequoiadendron giganteum chr6 6 CH_sgi_2081 2 2 0.000146145
Solanum lycopersicum SL4.0ch06 6 CH_sly_947 2 2 0.000880411
Solanum pennellii Spenn-ch06 6 CH_spe_796 2 2 0.00044479
Solanum tuberosum ST4.03ch06 6 CH_stu_560 3 13 0.0000393912

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001