Functional clusters

Information

  • Type InterPro
  • Description Senescence/spartin-associated, C-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 5 CH_aly_728 2 2 0.000990066
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 5 CH_arhy_1308 2 2 0.000838273
Arabidopsis thaliana Chr3 5 CH_ath_561 2 2 0.000429738
Cannabis sativa NC_044371.1 5 CH_cansat_582 2 2 0.000656642
Carya illinoinensis Chr04 5 CH_cil_812 2 2 0.000619828
Magnolia biondii Chr09 5 CH_mbi_650 3 8 0.000011089
Quercus lobata 11 5 CH_qlo_1781 2 2 0.000774433
Quercus lobata CM012294 5 CH_qlo_1782 2 2 0.000774433
Quercus lobata 6 5 CH_qlo_1783 2 2 0.000774433
Salix brachista GWHAAZH00000018 5 CH_sbr_662 2 2 0.00063014
Solanum tuberosum ST4.03ch02 5 CH_stu_747 3 27 0.000229984
Arabidopsis lyrata scaffold_3 6 CH_aly_728 2 2 0.000990066
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 6 CH_arhy_1308 2 2 0.000838273
Arabidopsis thaliana Chr3 6 CH_ath_561 2 2 0.000429738
Cannabis sativa NC_044371.1 6 CH_cansat_582 2 2 0.000656642
Carya illinoinensis Chr04 6 CH_cil_812 2 2 0.000619828
Magnolia biondii Chr09 6 CH_mbi_650 3 8 0.000011089
Quercus lobata 11 6 CH_qlo_1781 2 2 0.000774433
Quercus lobata CM012294 6 CH_qlo_1782 2 2 0.000774433
Quercus lobata 6 6 CH_qlo_1783 2 2 0.000774433
Salix brachista GWHAAZH00000018 6 CH_sbr_662 2 2 0.00063014
Solanum tuberosum ST4.03ch02 6 CH_stu_747 3 27 0.000229984

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001