Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF1163
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_2 | 5 | CH_aly_60 | 6 | 14 | 0.00000000000000710585 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_347 | 3 | 18 | 0.0000200789 |
| Brassica carinata | ChrB05 | 5 | CH_bca_1212 | 3 | 7 | 0.0000369209 |
| Brassica carinata | ChrC08 | 5 | CH_bca_247 | 4 | 4 | 0.000000000214366 |
| Brassica carinata | Contig684 | 5 | CH_bca_761 | 3 | 3 | 0.00000105557 |
| Brassica carinata | ChrB03 | 5 | CH_bca_832 | 4 | 23 | 0.00000189228 |
| Brassica carinata | ChrB03 | 5 | CH_bca_943 | 3 | 4 | 0.00000422159 |
| Brassica napus | C06 | 5 | CH_bna_147 | 6 | 41 | 0.00000000000277932 |
| Brassica napus | A07 | 5 | CH_bna_654 | 4 | 34 | 0.00000211094 |
| Brassica oleracea | C6 | 5 | CH_bol_308 | 3 | 5 | 0.000000560838 |
| Brassica rapa | A07 | 5 | CH_bra_173 | 4 | 30 | 0.000000227272 |
| Cardamine hirsuta | Chr2 | 5 | CH_chi_264 | 3 | 3 | 0.000000143334 |
| Capsella rubella | scaffold_2 | 5 | CH_cru_352 | 3 | 9 | 0.00000673235 |
| Eutrema salsugineum | scaffold_9 | 5 | CH_esa_440 | 2 | 4 | 0.000456864 |
| Arabidopsis lyrata | scaffold_2 | 6 | CH_aly_60 | 6 | 14 | 0.00000000000000710585 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_347 | 3 | 18 | 0.0000200789 |
| Brassica carinata | ChrB05 | 6 | CH_bca_1212 | 3 | 7 | 0.0000369209 |
| Brassica carinata | ChrC08 | 6 | CH_bca_247 | 4 | 4 | 0.000000000214366 |
| Brassica carinata | Contig684 | 6 | CH_bca_761 | 3 | 3 | 0.00000105557 |
| Brassica carinata | ChrB03 | 6 | CH_bca_832 | 4 | 23 | 0.00000189228 |
| Brassica carinata | ChrB03 | 6 | CH_bca_943 | 3 | 4 | 0.00000422159 |
| Brassica napus | C06 | 6 | CH_bna_147 | 6 | 41 | 0.00000000000277932 |
| Brassica napus | A07 | 6 | CH_bna_654 | 4 | 34 | 0.00000211094 |
| Brassica oleracea | C6 | 6 | CH_bol_308 | 3 | 5 | 0.000000560838 |
| Brassica rapa | A07 | 6 | CH_bra_173 | 4 | 30 | 0.000000227272 |
| Cardamine hirsuta | Chr2 | 6 | CH_chi_264 | 3 | 3 | 0.000000143334 |
| Capsella rubella | scaffold_2 | 6 | CH_cru_352 | 3 | 9 | 0.00000673235 |
| Eutrema salsugineum | scaffold_9 | 6 | CH_esa_440 | 2 | 4 | 0.000456864 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |