Functional clusters

Information

  • Type InterPro
  • Description Red chlorophyll catabolite reductase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 5 CH_acertr_191 3 3 0.000000007455
Cannabis sativa NC_044377.1 5 CH_cansat_464 2 2 0.000196993
Corylus avellana 11 5 CH_cav_777 2 2 0.000689981
Citrus clementina scaffold_7 5 CH_ccl_529 2 2 0.0000820311
Carpinus fangiana Cfa01 5 CH_cfa_467 2 3 0.000227195
Citrullus lanatus CG_Chr02 5 CH_cla_216 2 2 0.0000887115
Cucumis sativus L. chr2 5 CH_csa_340 2 2 0.0000834759
Eutrema salsugineum scaffold_14 5 CH_esa_410 2 2 0.00022845
Helianthus annuus HanXRQChr14 5 CH_han_888 2 3 0.000115926
Hydrangea macrophylla Hma1.2p1_0200F.1 5 CH_hma_88 3 3 0.0000000185113
Marchantia polymorpha scaffold_2 5 CH_mpo_189 2 2 0.000331327
Oryza sativa ssp. japonica chr10 5 CH_osa_215 3 4 0.0000000167348
Populus trichocarpa Chr07 5 CH_ptr_238 3 3 0.00000000501143
Phaseolus vulgaris Chr08 5 CH_pvu_453 2 2 0.0000734727
Quercus lobata 6 5 CH_qlo_1251 2 2 0.0000516289
Salix brachista GWHAAZH00000007 5 CH_sbr_461 2 2 0.000063014
Selenicereus undatus Scaffold_33679 5 CH_sun_114 3 15 0.00000360218
Acer truncatum chr3 6 CH_acertr_191 3 3 0.000000007455
Cannabis sativa NC_044377.1 6 CH_cansat_464 2 2 0.000196993
Corylus avellana 11 6 CH_cav_777 2 2 0.000689981
Citrus clementina scaffold_7 6 CH_ccl_529 2 2 0.0000820311
Carpinus fangiana Cfa01 6 CH_cfa_467 2 3 0.000227195
Citrullus lanatus CG_Chr02 6 CH_cla_216 2 2 0.0000887115
Cucumis melo chr11 6 CH_cme_304 2 2 0.0000667111
Cucumis sativus L. chr2 6 CH_csa_340 2 2 0.0000834759
Eutrema salsugineum scaffold_14 6 CH_esa_410 2 2 0.00022845
Helianthus annuus HanXRQChr14 6 CH_han_888 2 3 0.000115926
Hydrangea macrophylla Hma1.2p1_0200F.1 6 CH_hma_88 3 3 0.0000000185113
Marchantia polymorpha scaffold_2 6 CH_mpo_189 2 2 0.000331327
Oryza sativa ssp. japonica chr10 6 CH_osa_215 3 4 0.0000000167348
Populus trichocarpa Chr07 6 CH_ptr_238 3 3 0.00000000501143
Phaseolus vulgaris Chr08 6 CH_pvu_453 2 2 0.0000734727
Quercus lobata 6 6 CH_qlo_1251 2 2 0.0000516289
Salix brachista GWHAAZH00000007 6 CH_sbr_461 2 2 0.000063014
Selenicereus undatus Scaffold_33679 6 CH_sun_114 3 15 0.00000360218

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001