Functional clusters
Information
- Type InterPro
- Description Vacuolar protein sorting-associated protein 62
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_169 | 3 | 3 | 0.000000337686 |
| Brassica oleracea | C9 | 5 | CH_bol_460 | 3 | 6 | 0.0000145765 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_885 | 3 | 9 | 0.0000317656 |
| Cicer arietinum L. | Ca_LG1_v3 | 5 | CH_car_20 | 7 | 63 | 0.00000000000314345 |
| Coffea canephora | chr8 | 5 | CH_ccan_390 | 3 | 55 | 0.0000566539 |
| Ceratophyllum demersum | 1 | 5 | CH_cde_512 | 2 | 2 | 0.000789796 |
| Carya illinoinensis | Chr13 | 5 | CH_cil_214 | 4 | 4 | 0.000000000150036 |
| Carica papaya | supercontig_98 | 5 | CH_cpa_231 | 3 | 9 | 0.0000113797 |
| Davidia involucrata | GWHABJS00000017 | 5 | CH_din_146 | 4 | 4 | 0.000000000078815 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_394 | 3 | 3 | 0.00000344319 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 5 | CH_eca_462 | 3 | 4 | 0.0000137685 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_300 | 4 | 4 | 0.00000000126639 |
| Lupinus albus | Lalb_Chr25 | 5 | CH_lal_3 | 13 | 14 | 1.06488e-38 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_280 | 4 | 4 | 0.000000000135328 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_484 | 3 | 4 | 0.00000453285 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_386 | 3 | 3 | 0.0000000707617 |
| Malus domestica | Chr07 | 5 | CH_mdo_705 | 3 | 5 | 0.00000784895 |
| Medicago truncatula | chr2 | 5 | CH_mtr_260 | 5 | 9 | 0.00000000000346401 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_86 | 6 | 32 | 0.00000000000726461 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_557 | 3 | 3 | 0.0000000834367 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1275 | 3 | 3 | 0.00000101811 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_638 | 5 | 13 | 0.0000000000698697 |
| Selenicereus undatus | Scaffold_33676 | 5 | CH_sun_92 | 3 | 3 | 0.000000277212 |
| Vanilla planifolia | CM028156.1 | 5 | CH_vpl_347 | 4 | 54 | 0.0000477836 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_169 | 3 | 3 | 0.000000337686 |
| Brassica oleracea | C9 | 6 | CH_bol_460 | 3 | 6 | 0.0000145765 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_885 | 3 | 9 | 0.0000317656 |
| Cicer arietinum L. | Ca_LG1_v3 | 6 | CH_car_20 | 7 | 63 | 0.00000000000314345 |
| Coffea canephora | chr8 | 6 | CH_ccan_390 | 3 | 55 | 0.0000566539 |
| Ceratophyllum demersum | 1 | 6 | CH_cde_512 | 2 | 2 | 0.000789796 |
| Carya illinoinensis | Chr13 | 6 | CH_cil_214 | 4 | 4 | 0.000000000150036 |
| Carica papaya | supercontig_98 | 6 | CH_cpa_231 | 3 | 9 | 0.0000113797 |
| Davidia involucrata | GWHABJS00000017 | 6 | CH_din_146 | 4 | 4 | 0.000000000078815 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_394 | 3 | 3 | 0.00000344319 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 6 | CH_eca_462 | 3 | 4 | 0.0000137685 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_300 | 4 | 4 | 0.00000000126639 |
| Lupinus albus | Lalb_Chr25 | 6 | CH_lal_3 | 13 | 14 | 1.06488e-38 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_280 | 4 | 4 | 0.000000000135328 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_484 | 3 | 4 | 0.00000453285 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_386 | 3 | 3 | 0.0000000707617 |
| Malus domestica | Chr07 | 6 | CH_mdo_705 | 3 | 5 | 0.00000784895 |
| Medicago truncatula | chr2 | 6 | CH_mtr_260 | 5 | 9 | 0.00000000000346401 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_86 | 6 | 32 | 0.00000000000726461 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_557 | 3 | 3 | 0.0000000834367 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1275 | 3 | 3 | 0.00000101811 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_638 | 5 | 13 | 0.0000000000698697 |
| Selenicereus undatus | Scaffold_33676 | 6 | CH_sun_92 | 3 | 3 | 0.000000277212 |
| Vanilla planifolia | CM028156.1 | 6 | CH_vpl_347 | 4 | 54 | 0.0000477836 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |